Protein Alignment Hr83 and Hnf4

DIOPT Version :9

• Sequence 1: NP_649647.1
• Gene: Hr83 / 40783
• FlyBaseID: FBgn0037436
• Length: 278
• Species: Drosophila melanogaster
• Sequence 2: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Alignment Length: 317
• Identity: 84/317 - (26%)
• Similarity: 129/317 - (40%)
• Gaps: 96/317 - (30%)

  Fly     5 SACAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCL 69
            :.||:|||:::|||||.|.||||..||:||||:...|.| ....||||||.:||.|..||.::|.
  Fly   168 TVCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTC-RFARNCVVDKDKRNQCRYCRLRKCF 231

  Fly    70 AVGMNAAAVQEERGPRNQQVALYRTGRRQAPPSQA--------APSPTPHSQALHFQILAQILVT 126
            ..||...|||.||    .:::..||......|...        |.:.:..|:|      ...:..
  Fly   232 KAGMKKEAVQNER----DRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKA------GAAMEP 286

  Fly   127 CLRQAKANEQFALL-DRCQ---QDAIFQVVWS-------------EIFVLRASHWSLDISAMIDG 174
            .:.:..:|:|||.: |.|:   |..:..|.|:             ::.:|||.
  Fly   287 NINEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAH------------ 339

  Fly   175 CGDEQLKRLICEAHQLRADVLELN--------------------------FMESLILCRKELAI- 212
            .|:..|..|...:..|: |||.|:                          .::.|:...|::.|
  Fly   340 AGEHLLLGLSRRSMHLK-DVLLLSNNCVITRHCPDPLVSPNLDISRIGARIIDELVTVMKDVGID 403

  Fly   213 NAEYAVI----------LGSHSKAALISLARYTLQQ-SNYL---------RFGQLLL 249
            :.|:|.|          .|.:....:.||....|.. .:|:         |||::||
  Fly   404 DTEFACIKALVFFDPNAKGLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILL 460

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	42/80 (53%)
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	42/79 (53%)
		NR_LBD_HNF4_like	264..494	CDD:132729	39/216 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45444779
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24083
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940