DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr83 and Hr51

DIOPT Version :10

Sequence 1:NP_649647.1 Gene:Hr83 / 40783 FlyBaseID:FBgn0037436 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster


Alignment Length:448 Identity:105/448 - (23%)
Similarity:141/448 - (31%) Gaps:214/448 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            |.||||.|||||||:..|:|||.||||||||...|.|.|..|.||||||.||.|.:||.::||.:
  Fly   111 CVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQM 175

  Fly    72 GMNAAAVQEERGPRN-------------------------------------------------- 86
            |||..|||.||.|||                                                  
  Fly   176 GMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLG 240

  Fly    87 ----------------QQVALYRTGRRQAP----------------------------------- 100
                            .|:|....|....|                                   
  Fly   241 SLPTGRLLHHNHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHSTNSSSN 305

  Fly   101 ----PSQAAP-------------------SPT------------------PHSQA---------- 114
                ||..||                   |||                  ||:.:          
  Fly   306 HSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIMPQ 370

  Fly   115 -------LH-----FQILAQILVTCLRQAKANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSLD 167
                   .|     ::..|::|...::.||....||.|....|..:.:..|||:|:|.|..|.:.
  Fly   371 FMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWCIP 435

  Fly   168 ISAMIDGC-----------------GD------------EQLKRLICEAHQLRADVLELNFMESL 203
            :..  .||                 ||            ..|..:.|:...:..|..|...::::
  Fly   436 LDP--TGCALFSVAEHCNNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAI 498

  Fly   204 ILCRKELA----------INAEYAVILGSHSKAALISLARYTLQQSNYLRFGQLLLGL 251
            :|.|.|..          :..:..|:|..|:|      .::|.|   ..|||:|||.|
  Fly   499 VLFRPETRGLKDPAQIENLQDQAHVMLSQHTK------TQFTAQ---IARFGRLLLML 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr83NP_649647.1 NR_DBD_PNR_like_2 7..88 CDD:143515 52/146 (36%)
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 52/82 (63%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 42/205 (20%)

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