DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr83 and nr2f6a

DIOPT Version :9

Sequence 1:NP_649647.1 Gene:Hr83 / 40783 FlyBaseID:FBgn0037436 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_991120.1 Gene:nr2f6a / 325637 ZFINID:ZDB-GENE-030131-4362 Length:402 Species:Danio rerio


Alignment Length:328 Identity:84/328 - (25%)
Similarity:135/328 - (41%) Gaps:102/328 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            |.||||:||||||||..|:||..||||||||..:|.|.: ..:|.:|:..||.|..||.::|..|
Zfish    53 CVVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLNYTCRS-NRDCQIDQHHRNQCQYCRLKKCFRV 116

  Fly    72 GMNAAAVQEERGPRNQQVALYRTGRRQAPPSQAAPSPT--------------------------- 109
            ||...|||                |.:.|||.::.||:                           
Zfish   117 GMRKEAVQ----------------RGRIPPSHSSLSPSTTPVGGNAGGGVSEFYNGQPVSELISQ 165

  Fly   110 -------PHSQALH---------------------FQILAQILVTCLRQAKANEQFALLDRCQQD 146
                   |:|:..|                     .::.|::|.:.:..|:....|..|...:|.
Zfish   166 LLRAEPYPNSRYSHQYNQQMQGGGGGGSGMGIDSICELAARLLFSIIEWARNIPYFPELPVSEQV 230

  Fly   147 AIFQVVWSEIFVLRASHWSLDI--SAMIDGCG---------------------DEQLKRLICEAH 188
            |:.::.|||:|:|.|:..:|.:  :.::...|                     .:|:::|.    
Zfish   231 ALLRLSWSELFILNAAQSALPLHMAPLLAAAGFHSSPMSAERVVSFMDQVRVFQDQVEKLT---- 291

  Fly   189 QLRADVLELNFMESLILCRKELAINAEYAVILGSHSKAALISLARYTLQQ--SNYLRFGQLLLGL 251
            :|:.|..|.:.::::.|...:.....:.|.:.....||. ::|..|...|  ....|||:|||.|
Zfish   292 RLQVDSAEYSCLKAIALFSPDACGLTDPAHVESLQEKAQ-VALTEYERMQYPGQPQRFGRLLLRL 355

  Fly   252 RQL 254
            ..|
Zfish   356 PAL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr83NP_649647.1 NR_DBD_PNR_like_2 7..88 CDD:143515 40/80 (50%)
nr2f6aNP_991120.1 NR_DBD_COUP_TF 53..125 CDD:143516 40/88 (45%)
NR_LBD_COUP-TF 158..401 CDD:132746 38/206 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577472
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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