DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr83 and Hnf4g

DIOPT Version :9

Sequence 1:NP_649647.1 Gene:Hr83 / 40783 FlyBaseID:FBgn0037436 Length:278 Species:Drosophila melanogaster
Sequence 2:XP_006530135.1 Gene:Hnf4g / 30942 MGIID:1353604 Length:462 Species:Mus musculus


Alignment Length:293 Identity:87/293 - (29%)
Similarity:132/293 - (45%) Gaps:54/293 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            ||:|||:::|||||.|.||||..||:||:|:...|:| .....|||||.:||.|..||.::|...
Mouse    66 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSC-RFSRQCVVDKDKRNQCRYCRLRKCFRA 129

  Fly    72 GMNAAAVQEERGPRNQQVALYR---------TGRRQAPPSQ-AAPSPTPHSQALHFQILAQILVT 126
            ||...|||.||...:.:.:.|.         ..:.:....| :.|||: .|..::.:.:|.|...
Mouse   130 GMKKEAVQNERDRISTRRSTYEGSNIPSINTLAQAEVRSCQISVPSPS-SSTDINIKKIASISDV 193

  Fly   127 C--LRQ--------AKANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSL---DISAMIDGCGDE 178
            |  ::|        ||....|..|....|.|:.:....|..:|.|:..|:   ||..:    |:.
Mouse   194 CESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLL----GNH 254

  Fly   179 Q-LKRLICEAHQLRADVLELNFMESLILCRKELAI-NAEYAVILG---------SHSKAALISLA 232
            . :.|..||....|   :....::.|:...:|:.| :.|||.:..         ..|....|...
Mouse   255 YVIHRNSCEVEVSR---VANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNM 316

  Fly   233 RYTLQQS--NYL---------RFGQLLLGLRQL 254
            |:.:|.|  :|:         |||:|||.|..|
Mouse   317 RFQVQISLEDYINDRQYDSRGRFGELLLLLPTL 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr83NP_649647.1 NR_DBD_PNR_like_2 7..88 CDD:143515 40/80 (50%)
Hnf4gXP_006530135.1 NR_DBD_HNF4A 66..141 CDD:143518 39/75 (52%)
NR_LBD_HNF4_like 157..378 CDD:132729 46/201 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834531
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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