DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hr83 and nr2f5

DIOPT Version :9

Sequence 1:NP_649647.1 Gene:Hr83 / 40783 FlyBaseID:FBgn0037436 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_571261.1 Gene:nr2f5 / 30427 ZFINID:ZDB-GENE-990415-253 Length:403 Species:Danio rerio


Alignment Length:313 Identity:96/313 - (30%)
Similarity:134/313 - (42%) Gaps:86/313 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGN--CVVDKARRNWCPSCRFQRCL 69
            |.||||:|||||||...|:||..||||||||..||.|   .||  |.:|:..||.|..||.::||
Zfish    54 CMVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTC---RGNRDCPIDQHHRNQCQYCRLKKCL 115

  Fly    70 AVGMNAAAVQEERGPRNQQVALYRTGRRQAPPSQ------------------------AAPSPTP 110
            .|||...|||  ||         |....|:.|.|                        |.|.||.
Zfish   116 KVGMRREAVQ--RG---------RMSNSQSSPGQYLSNGSDPYNGQPYLSGFISLLLRAEPYPTS 169

  Fly   111 HSQALHFQ------------ILAQILVTCLRQAKANEQFALLDRCQQDAIFQVVWSEIFVLRASH 163
            ...|...|            :.|::|.:.:..||....|..|....|.|:.::.|||:|||.|:.
Zfish   170 RYGAQCMQSNNLMGIENICELAARLLFSAVEWAKNIPFFPDLQLMDQVALLRMSWSELFVLNAAQ 234

  Fly   164 WS--LDISAMIDGCG---------------------DEQLKRLICEAHQLRADVLELNFMESLIL 205
            .|  |.::.::...|                     .||:::|    ..|:.|..|.:.::|::|
Zfish   235 CSMPLHVAPLLAAAGLHASPMSAERVVAFMDHIRVFQEQVEKL----KALQVDTAEYSCLKSIVL 295

  Fly   206 CRKELAINAEYAVI--LGSHSKAALISLAR--YTLQQSNYLRFGQLLLGLRQL 254
            ...:....::.|.:  :...|:.||....|  |..|.:   |||:|||.|..|
Zfish   296 FTSDAMGLSDVAHVESIQEKSQCALEEYVRNQYPNQPN---RFGRLLLRLPSL 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr83NP_649647.1 NR_DBD_PNR_like_2 7..88 CDD:143515 45/82 (55%)
nr2f5NP_571261.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..44
NR_DBD_COUP_TF 54..126 CDD:143516 43/76 (57%)
NR_LBD_COUP-TF 152..387 CDD:132746 47/201 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577469
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.