DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr83 and Nr2c2

DIOPT Version :10

Sequence 1:NP_649647.1 Gene:Hr83 / 40783 FlyBaseID:FBgn0037436 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_001334271.1 Gene:Nr2c2 / 22026 MGIID:1352466 Length:629 Species:Mus musculus


Alignment Length:99 Identity:43/99 - (43%)
Similarity:62/99 - (62%) Gaps:9/99 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            |.||||::||:|||...|:||..|||||||:..:|:|.: ..:|:::|..||.|..||.::||.:
Mouse   150 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRS-SQDCIINKHHRNRCQFCRLKKCLEM 213

  Fly    72 GMNAAAVQEERGPRNQQVALYRTGRRQAPPSQAA 105
            ||...:||.||.|.:.|        |:.|.:.||
Mouse   214 GMKMESVQSERKPFDVQ--------REKPSNCAA 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr83NP_649647.1 NR_DBD_PNR_like_2 7..88 CDD:143515 38/80 (48%)
Nr2c2NP_001334271.1 NR_DBD_TR2_like 145..231 CDD:143525 39/89 (44%)
NR_LBD_TR2_like 394..615 CDD:132750
Blue background indicates that the domain is not in the aligned region.

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