Protein Alignment Hr83 and nhr-247

DIOPT Version :10

• Sequence 1: NP_649647.1
• Gene: Hr83 / 40783
• FlyBaseID: FBgn0037436
• Length: 278
• Species: Drosophila melanogaster
• Sequence 2: NP_506798.1
• Gene: nhr-247 / 191500
• WormBaseID: WBGene00014193
• Length: 337
• Species: Caenorhabditis elegans
• Alignment Length: 329
• Identity: 78/329 - (23%)
• Similarity: 118/329 - (35%)
• Gaps: 81/329 - (24%)

  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            |.|||...:|..||...|.||..||:|::...:...| ....||.:....:|.|.|||.|:||.|
 Worm    14 CLVCGGTPNGSRYGALACLGCIVFFRRAISNANVKNC-DNNSNCKIGFETKNCCRSCRLQKCLQV 77

  Fly    72 GMNAAAVQEER--GPR--------NQQVALY-----------RTGRRQAP----PSQAAPSPTPH 111
            |||..|:|...  |||        .|:..|:           |..:.||.    ..||.......
 Worm    78 GMNPKAIQHRDLIGPRKPVKVEPETQKSKLHHLLELQRKQWSRNQKHQAQTGSFKKQADSDDVRF 142

  Fly   112 SQALHFQILAQILVTCLRQAKANEQFALLDRCQQDAIFQVVWSE-----IFVLRASHWSLDISAM 171
            ..:|.||       ..|..|...|.|..|...|:    .:|.||     |.:.:|...:.|..
 Worm   143 VMSLGFQ-------NALSWANHFETFTKLSEDQK----ALVMSEFGIAFILIEQAFKTAEDTE-- 194

  Fly   172 IDGC---------------------------GDEQLKRLICEAHQLRADVLELNFMESLILCRKE 209
             :||                           .|...|.|......|:.|..|...:::::|..:.
 Worm   195 -EGCWILQNDTFLEISDTRNVQGQKRINSEFADFLFKTLSEPIRSLQLDKFECVVLKTMVLLSQS 258

  Fly   210 LAINAEYAVILGSHSKAALISLARYTLQ---QSNYLRFGQLLLGLRQLCLRRFDCALSCMFRSVV 271
            .. :..|......:.|..:.:|.:|.|:   ::...|||:::     |.|....||:..::....
 Worm   259 FP-SQLYLPRFEENRKNCMKTLMKYELRKFPETGSQRFGEII-----LLLSSVRCAVKQLYNHTK 317

  Fly   272 RDIL 275
            |..|
 Worm   318 RSDL 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	33/90 (37%)
nhr-247	NP_506798.1	NR_DBD_HNF4A	14..88	CDD:143518	30/74 (41%)
		HOLI	144..308	CDD:214658	34/183 (19%)