Protein Alignment Hr83 and nhr-236

DIOPT Version :9

• Sequence 1: NP_649647.1
• Gene: Hr83 / 40783
• FlyBaseID: FBgn0037436
• Length: 278
• Species: Drosophila melanogaster
• Sequence 2: NP_500190.3
• Gene: nhr-236 / 189677
• WormBaseID: WBGene00021417
• Length: 283
• Species: Caenorhabditis elegans
• Alignment Length: 268
• Identity: 85/268 - (31%)
• Similarity: 119/268 - (44%)
• Gaps: 55/268 - (20%)

  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            |.||||::||:||||..||||..|||||:||...|:| ...|:||:|..|||.|.:||||:|:.|
 Worm    13 CRVCGDRASGRHYGVLSCDGCRGFFKRSIRRNLRYSC-KESGDCVIDVTRRNQCQACRFQKCITV 76

  Fly    72 GMNAAAVQEER-----GPRNQQVALYRTGRRQAP--PSQAAPSPTPHSQALHFQILAQILVTCLR 129
            .||..|||.||     .|:..| .|.:..|.:.|  |....|...|              ::||.
 Worm    77 AMNRHAVQHERLGAPPEPKPTQ-TLIKAKRIRKPGIPEVIDPISDP--------------ISCLS 126

  Fly   130 QA--------KANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSLDISAMIDGCGDEQLKRLICE 186
            ..        .|| .|...||   ..||...|..:|:......|  .:::::.|.:|:|:.:...
 Worm   127 AVIRWWSSLPPAN-GFPASDR---RIIFSNCWHSLFLFHVICQS--GTSLVNDCNNEKLRSISKT 185

  Fly   187 AHQLRADVLELNFMESLILCRKE----------LAINAEYAVILGSHSKAALISLARYTLQQSNY 241
            ...|..:|:|...:..:|:.|.|          |:.......||..:..|.:.        ||..
 Worm   186 IKALNLNVVEQWAITVIIIYRSEDGRLESKSETLSTQIGAMQILAENHAARVF--------QSRS 242

  Fly   242 LRFGQLLL 249
            .|..||||
 Worm   243 TRCAQLLL 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	46/85 (54%)
nhr-236	NP_500190.3	NR_DBD_PNR_like_1	13..88	CDD:143538	44/75 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H50838
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.870