Protein Alignment Hr83 and nhr-111

DIOPT Version :10

• Sequence 1: NP_649647.1
• Gene: Hr83 / 40783
• FlyBaseID: FBgn0037436
• Length: 278
• Species: Drosophila melanogaster
• Sequence 2: NP_507060.2
• Gene: nhr-111 / 185757
• WormBaseID: WBGene00003701
• Length: 311
• Species: Caenorhabditis elegans
• Alignment Length: 261
• Identity: 75/261 - (28%)
• Similarity: 116/261 - (44%)
• Gaps: 28/261 - (10%)

  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            ||||||.|:|.||||..|.|||.||:|:||....:.|....||||:|||.||.|.|||.::|...
 Worm    42 CAVCGDTSNGNHYGVPTCFGCSGFFRRTVRNKLVHGCWNGDGNCVIDKANRNRCKSCRIKKCFKK 106

  Fly    72 GMNAAAVQEERGPRNQQVAL-----YRTGRRQAPPSQAAPSPTPHSQALHFQILAQILV---TCL 128
            |||..|||.||...:..|..     :|...:...|:.:......|..|.|....:.:||   ..|
 Worm   107 GMNKNAVQPERTSHSYTVEYVELPSFREYSKGLLPTHSDRLRFQHEHAQHEIDTSSVLVHLKNAL 171

  Fly   129 RQAKANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSLDISAMIDGCGDEQLKRLICEAHQLRAD 193
            :..:....||:|...::..|....|..:..|.....|..|..      ||:..:|..:...|...
 Worm   172 QWVQQFSLFAVLSDVEKSQIILTQWPHLLCLALFENSEKIFI------DEKFAQLAEKFKSLELS 230

  Fly   194 VLELNFMESLILCRK-----ELAINAEYAVILGSHSKAALISLARYTLQQSNYLRFGQLLLGLRQ 253
            ..:...::.:|:..:     :|..:.:..:.:|..::..|         :|:..:.|:||..|.:
 Worm   231 AQDYFLLKGIIIFTETKDGTDLKFDRQLDICIGLLNQLHL---------ESSKSKSGRLLFLLGE 286

  Fly   254 L 254
            |
 Worm   287 L 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	44/80 (55%)
nhr-111	NP_507060.2	NR_DBD_like	42..114	CDD:143512	40/71 (56%)