Protein Alignment Hr83 and nhr-108

DIOPT Version :10

• Sequence 1: NP_649647.1
• Gene: Hr83 / 40783
• FlyBaseID: FBgn0037436
• Length: 278
• Species: Drosophila melanogaster
• Sequence 2: NP_506987.1
• Gene: nhr-108 / 180065
• WormBaseID: WBGene00003698
• Length: 338
• Species: Caenorhabditis elegans
• Alignment Length: 349
• Identity: 75/349 - (21%)
• Similarity: 108/349 - (30%)
• Gaps: 142/349 - (40%)

  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACI--ALVGNCVVDKARRNWCPSCRFQRCL 69
            |.|||:.|....:|...|..|:.||:|.:   .|.|.|  ...|.|.:.|..|..|.|||||:||
 Worm    10 CMVCGEISYSIRFGAVSCRACAEFFRRKI---VSKARIPKRCNGACDLGKYHRKTCQSCRFQKCL 71

  Fly    70 AVGM----NAAAVQEERGPRNQQVALYRTGRRQA------------PPSQAAPSPTPHSQ----- 113
            .:||    .|:.....|...|.|..|  :|..:|            ......|....|.:
 Worm    72 KIGMLEKVVASRTPVNRRSENNQTIL--SGLEKAYDKLENSRDNVFDRKNKIPKYCNHQELDDMF 134

  Fly   114 -----------------------------ALHFQILAQILVTCLRQAKANEQFAL---------- 139
                                         :.||.|...:|....| |.....:.|
 Worm   135 EIDIKLISTHFIQFFESKSSLENNQNKVLSTHFIIRFSLLEVAFR-AFGKPTYILPNNDIIDVSK 198

  Fly   140 LDRCQQ-------------DAIFQVVW--------SEIFVLRASHWSLDISAMIDGCG------- 176
            ||:..|             ..|.|..|        :|:|.:     :||.|..:..|.
 Worm   199 LDKVYQHLETGEDERGKNSQVILQRFWQMNEKTMKTEVFPV-----NLDQSEFLFLCALIYWDFG 258

  Fly   177 -DEQLKRLICEAHQLRADVLELNFMESLILCRKELAINAEYAVILGSHSKAALISLARYTLQQSN 240
             :.|.::.:.|..::|..||            |||   .||                    ::||
 Worm   259 IENQSEKCLEECQRMRTQVL------------KEL---TEY--------------------EKSN 288

  Fly   241 Y----LRFGQLLLGLRQLCLRRFD 260
            |    ||..| ::|:.|...:..|
 Worm   289 YPENELRVAQ-VIGILQALQKTLD 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	31/86 (36%)
nhr-108	NP_506987.1	ZnF_C4	9..75	CDD:197701	26/67 (39%)
		HOLI	134..309	CDD:214658	37/216 (17%)