DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18048 and Y49A3A.3

DIOPT Version :10

Sequence 1:NP_649646.3 Gene:CG18048 / 40782 FlyBaseID:FBgn0037435 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_506560.1 Gene:Y49A3A.3 / 3565972 WormBaseID:WBGene00013026 Length:390 Species:Caenorhabditis elegans


Alignment Length:435 Identity:128/435 - (29%)
Similarity:212/435 - (48%) Gaps:63/435 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MTTVKAEKPVTTTCSYWVLRKKRRCKMTANKGSEFCGAHASSAATTATCDEKAREDSFQERIPCP 72
            :.:||.::.....|.|.:..|||||||...||:.|||.|:            ..:.:..:|:.||
 Worm     3 LDSVKQQQQQNACCEYILPIKKRRCKMLVKKGNRFCGEHS------------IHDQNNTDRMVCP 55

  Fly    73 LDHKHTVFKRKLAKHLTICNARDQESSLPYIVKGVNS--GDNLKETDEDLNKFNQIKLHELA-DE 134
            .|.|||:.|..|..|||.||:|.:::.  ||....||  |:. |.||         |:...| ::
 Worm    56 NDGKHTILKADLEIHLTRCNSRIRDAE--YIKIDANSIRGET-KRTD---------KIDRRATED 108

  Fly   135 EFYSLIDKVKNLYDKHINSSIQELQLEHESLKEELSR-KDYGQETLRQLTQTTSLLGILEHDHQL 198
            |..:.:.|:...|:..:...:...|..:|.:::.::: .|......:||.|.:|:||.:|....|
 Worm   109 EICTTVHKIWKCYETDVMDRLIVEQQRNELVEQNIAQNSDLNNTKKKQLYQISSILGHIESTGLL 173

  Fly   199 --MDHTSYIEFGAGKGQLAYFLATVLQEQKLSHSQVVLIDRMSLRHKKDNKLANRE----VVQRI 257
              ...:...|.|||||||||:::     :...:...:|:||...|:|.|. .|.||    .::|.
 Worm   174 PTCSKSCMFELGAGKGQLAYWIS-----KAAPNGNYILMDRSGSRNKFDT-AAFRENPNLSMKRF 232

  Fly   258 RADIADLKLSALPELKKTQRTVAFSKHLCGAATDLTLRCILGDG---NASSDYVLIALCCHHRCS 319
            |..|..:.||.:.|||.:::.:|..||.||:|||..:|.::..|   ||:    |:..||||:..
 Worm   233 RCSIEHMDLSKIDELKNSEKILAICKHFCGSATDAGIRSLMNSGLQFNAA----LLIPCCHHKSR 293

  Fly   320 WRSYVGRKFLQEAGIGPR-EFVILTKMVSWAVCGTGLSRERRKAMESADFQLTETNTQRLTRQER 383
            :..|.|..||::..:... .|..|..:.|:|..| .:..|..:..:|....|             
 Worm   294 FAEYGGHDFLEKWEMNDEASFAALRYIASFATNG-AVDTEATEGWKSIHPPL------------- 344

  Fly   384 EQIGQQCKRVLDYGRLEHLRSHGYQAELKFYVPRDVTLENVVLLA 428
             ::|::.|.:|:.||...|.|.|::..:..|||.:|:.||:::||
 Worm   345 -ELGRRAKAILEIGRAIWLESVGFKTRVVEYVPPEVSPENLLILA 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18048NP_649646.3 zf-TRM13_CCCH 21..44 CDD:463331 12/22 (55%)
zf-U11-48K 68..92 CDD:461603 12/23 (52%)
TRM13 184..429 CDD:398743 78/255 (31%)
Y49A3A.3NP_506560.1 zf-TRM13_CCCH 16..42 CDD:463331 14/25 (56%)
zf-U11-48K 51..75 CDD:461603 12/23 (52%)
AdoMet_MTases 159..388 CDD:473071 76/253 (30%)

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