Protein Alignment SmD2 and LSM2

DIOPT Version :9

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: NP_009527.1
• Gene: LSM2 / 852255
• SGDID: S000000122
• Length: 95
• Species: Saccharomyces cerevisiae
• Alignment Length: 72
• Identity: 15/72 - (20%)
• Similarity: 36/72 - (50%)
• Gaps: 12/72 - (16%)

  Fly    40 QVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDS 104
            :|::..:|:.::.|.:::.|:..|:.|:|:         :...:||...:..   :..:|:||.:
Yeast    14 EVVVELKNDIEIKGTLQSVDQFLNLKLDNI---------SCTDEKKYPHLGS---VRNIFIRGST 66

  Fly   105 VILVLRN 111
            |..|..|
Yeast    67 VRYVYLN 73

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	15/72 (21%)
LSM2	NP_009527.1	LSm2	2..90	CDD:212472	15/72 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810