DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmD2 and MAK31

DIOPT Version :9

Sequence 1:NP_649645.1 Gene:SmD2 / 40781 FlyBaseID:FBgn0261789 Length:119 Species:Drosophila melanogaster
Sequence 2:NP_009948.1 Gene:MAK31 / 850383 SGDID:S000000614 Length:88 Species:Saccharomyces cerevisiae


Alignment Length:80 Identity:19/80 - (23%)
Similarity:40/80 - (50%) Gaps:15/80 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMW---------TELPRTGKGKKKV---KPVN 90
            || ::::...::.|:|.:.|.|...|::|::|:|..         ..:||  :..|.:   |||.
Yeast    12 NT-LIVSLTEDRILVGSLVAVDAQMNLLLDHVEERMGSSSRMMGLVSVPR--RSVKTIMIDKPVL 73

  Fly    91 KDRFISKMFLRGDSV 105
            ::...:|:.|..:.|
Yeast    74 QELTANKVELMANIV 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmD2NP_649645.1 Sm_D2 23..112 CDD:212467 19/80 (24%)
MAK31NP_009948.1 LSMD1 3..69 CDD:212486 13/59 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1958
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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