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Protein Alignment SmD2 and AT3G62840
DIOPT Version :9
Sequence 1: | NP_649645.1 |
Gene: | SmD2 / 40781 |
FlyBaseID: | FBgn0261789 |
Length: | 119 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_567134.3 |
Gene: | AT3G62840 / 825459 |
AraportID: | AT3G62840 |
Length: | 109 |
Species: | Arabidopsis thaliana |
Alignment Length: | 108 |
Identity: | 87/108 - (80%) |
Similarity: | 96/108 - (88%) |
Gaps: | 2/108 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 KPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENV 69
||..|.|.: .:.|||||||||||||..|||||||||||||||:||||||:|||||||||||||
plant 3 KPMEEDTNQ--GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENV 65
Fly 70 KEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNP 112
:|||||:|:|||||||..|||:|||||||||||||||:|||||
plant 66 REMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNP 108
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmD2 | NP_649645.1 |
Sm_D2 |
23..112 |
CDD:212467 |
77/88 (88%) |
AT3G62840 | NP_567134.3 |
Sm_D2 |
19..108 |
CDD:212467 |
77/88 (88%) |
Information from Original Tools:
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