Protein Alignment SmD2 and Snrpd2

DIOPT Version :10

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: NP_001102869.1
• Gene: Snrpd2 / 680309
• RGDID: 1593018
• Length: 118
• Species: Rattus norvegicus
• Alignment Length: 117
• Identity: 103/117 - (88%)
• Similarity: 111/117 - (94%)
• Gaps: 2/117 - (1%)

  Fly     3 LVKPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLE 67
            |.|||||:|||||.::|||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     4 LNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLE 68

  Fly    68 NVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLATAAGK 119
            ||||||||:|::||||||.|||||||:||||||||||||:||||||  .|||
  Rat    69 NVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPL--IAGK 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	82/88 (93%)
Snrpd2	NP_001102869.1	Sm_D2	24..113	CDD:212467	82/88 (93%)