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Protein Alignment SmD2 and Snrpd2
DIOPT Version :9
Sequence 1: | NP_649645.1 |
Gene: | SmD2 / 40781 |
FlyBaseID: | FBgn0261789 |
Length: | 119 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102869.1 |
Gene: | Snrpd2 / 680309 |
RGDID: | 1593018 |
Length: | 118 |
Species: | Rattus norvegicus |
Alignment Length: | 117 |
Identity: | 103/117 - (88%) |
Similarity: | 111/117 - (94%) |
Gaps: | 2/117 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 LVKPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLE 67
|.|||||:|||||.::|||||||||||||||||||||||||||||||||||||||||||||||||
Rat 4 LNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLE 68
Fly 68 NVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLATAAGK 119
||||||||:|::||||||.|||||||:||||||||||||:|||||| .|||
Rat 69 NVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPL--IAGK 118
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmD2 | NP_649645.1 |
Sm_D2 |
23..112 |
CDD:212467 |
82/88 (93%) |
Snrpd2 | NP_001102869.1 |
Sm_D2 |
24..113 |
CDD:212467 |
82/88 (93%) |
Information from Original Tools:
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