Protein Alignment SmD2 and lsm5

DIOPT Version :9

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: NP_001093908.1
• Gene: lsm5 / 563948
• ZFINID: ZDB-GENE-070822-23
• Length: 91
• Species: Danio rerio
• Alignment Length: 83
• Identity: 20/83 - (24%)
• Similarity: 47/83 - (56%)
• Gaps: 13/83 - (15%)

  Fly    27 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNK 91
            ||.::.:.:.:...:::  :|:|:::|.:..||...|||||:|    ||...|.:|::..|
Zfish    14 PLELVDKCIGSRIHIVM--KNDKEIVGTLLGFDDFVNMVLEDV----TEFEITPEGRRITK---- 68

  Fly    92 DRFISKMFLRGDSVILVL 109
               :.::.|.|:::.:::
Zfish    69 ---LDQILLNGNNITMLI 83

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	20/83 (24%)
lsm5	NP_001093908.1	LSm5	11..86	CDD:212479	20/83 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810