Protein Alignment SmD2 and LSm3

DIOPT Version :10

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: NP_732931.1
• Gene: LSm3 / 42842
• FlyBaseID: FBgn0051184
• Length: 103
• Species: Drosophila melanogaster
• Alignment Length: 82
• Identity: 31/82 - (37%)
• Similarity: 49/82 - (59%)
• Gaps: 3/82 - (3%)

  Fly    27 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNK 91
            ||.::..|:  :.:|.:..||.::|.||:.|||:|.||||.:.:|..|.:....:..::|....|
  Fly    18 PLDLIRLSL--DEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAK 80

  Fly    92 DRFISKMFLRGDSVILV 108
             |.|..:|:|||.||||
  Fly    81 -RTIPMLFVRGDGVILV 96

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	31/82 (38%)
LSm3	NP_732931.1	LSm3	17..98	CDD:212477	31/82 (38%)