Protein Alignment SmD2 and CG6610

DIOPT Version :9

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: NP_001261461.1
• Gene: CG6610 / 38693
• FlyBaseID: FBgn0035675
• Length: 91
• Species: Drosophila melanogaster
• Alignment Length: 109
• Identity: 22/109 - (20%)
• Similarity: 52/109 - (47%)
• Gaps: 25/109 - (22%)

  Fly     1 MALVKPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMV 65
            |..|.|.|.::            ...||.::.:.:.:...:::  :|:|:::|.:..||...||:
  Fly     1 MTAVPPPSNIS------------TLMPLELVDKCIGSRIHIIM--KNDKEMVGTLLGFDDFVNML 51

  Fly    66 LENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 109
            |::|    ||...|..|::..|       :.::.|.|:::.:::
  Fly    52 LDDV----TEYENTPDGRRITK-------LDQILLNGNNITMLV 84

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	18/87 (21%)
CG6610	NP_001261461.1	LSm5	12..87	CDD:212479	18/86 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810