Protein Alignment SmD2 and Snrpd2l

DIOPT Version :9

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: XP_214847.2
• Gene: Snrpd2l / 292688
• RGDID: 1305065
• Length: 118
• Species: Rattus norvegicus
• Alignment Length: 117
• Identity: 100/117 - (85%)
• Similarity: 111/117 - (94%)
• Gaps: 2/117 - (1%)

  Fly     3 LVKPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLE 67
            |.|||||:|||||.::||||||||||||||||:||||||||||||||||||||||||||||||||
  Rat     4 LNKPKSEMTPEELQKREEEEFNTGPLSVLTQSIKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLE 68

  Fly    68 NVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLATAAGK 119
            ||||:|||:|::||||||.|||||||:||||||||:|||:||||||  .|||
  Rat    69 NVKEIWTEVPKSGKGKKKSKPVNKDRYISKMFLRGNSVIVVLRNPL--IAGK 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	79/88 (90%)
Snrpd2l	XP_214847.2	Sm_D2	24..113	CDD:212467	79/88 (90%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352689
Domainoid	1	1.000	144	1.000	Domainoid score	I4485
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	208	1.000	Inparanoid score	I3611
OMA	1	1.010	-	-		QHG53765
OrthoDB	1	1.010	-	-		D1581611at2759
OrthoFinder	1	1.000	-	-		FOG0004313
OrthoInspector	1	1.000	-	-		otm45913
orthoMCL	1	0.900	-	-		OOG6_102323
Panther	1	1.100	-	-	O	PTHR12777
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3049
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	14	13.810