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Protein Alignment SmD2 and smd2
DIOPT Version :9
Sequence 1: | NP_649645.1 |
Gene: | SmD2 / 40781 |
FlyBaseID: | FBgn0261789 |
Length: | 119 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_594506.1 |
Gene: | smd2 / 2542480 |
PomBaseID: | SPAC2C4.03c |
Length: | 115 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 110 |
Identity: | 83/110 - (75%) |
Similarity: | 91/110 - (82%) |
Gaps: | 1/110 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 KPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENV 69
||:|||:..||||.||.||:.||||||.|:|||:.|||||||||||||.||||||||.|||||||
pombe 7 KPRSELSEIELARLEEYEFSAGPLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENV 71
Fly 70 KEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLA 114
||||||..||..|||. |.:||||||||||||||.|:||:|.|.|
pombe 72 KEMWTEKKRTASGKKG-KAINKDRFISKMFLRGDGVVLVVRIPSA 115
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmD2 | NP_649645.1 |
Sm_D2 |
23..112 |
CDD:212467 |
69/88 (78%) |
smd2 | NP_594506.1 |
Sm_D2 |
25..113 |
CDD:212467 |
69/88 (78%) |
Information from Original Tools:
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