Protein Alignment SmD2 and snr-2

DIOPT Version :9

• Sequence 1: NP_649645.1
• Gene: SmD2 / 40781
• FlyBaseID: FBgn0261789
• Length: 119
• Species: Drosophila melanogaster
• Sequence 2: NP_493348.1
• Gene: snr-2 / 173204
• WormBaseID: WBGene00004915
• Length: 160
• Species: Caenorhabditis elegans
• Alignment Length: 107
• Identity: 27/107 - (25%)
• Similarity: 47/107 - (43%)
• Gaps: 26/107 - (24%)

  Fly    31 LTQSVKNNTQVLINCR------NNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGK---GKKKV 86
            :|.|..|.....:|.|      :.:..:|..||||:|.|::|...:|.....|:.||   |::|
 Worm     1 MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTDGEEK- 64

  Fly    87 KPVNKDRFISKMFLRGDSVI-LVLRNP---------LATAAG 118
                  |.:..:.:||:.:: :.:..|         ||.|.|
 Worm    65 ------RILGLVLVRGEHIVSMTVDGPPPRDDDSVRLAKAGG 100

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmD2	NP_649645.1	Sm_D2	23..112	CDD:212467	22/90 (24%)
snr-2	NP_493348.1	Sm_B	5..83	CDD:212464	20/84 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1958
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810