DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17919 and MRPL38

DIOPT Version :9

Sequence 1:NP_649644.1 Gene:CG17919 / 40780 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_115867.2 Gene:MRPL38 / 64978 HGNCID:14033 Length:380 Species:Homo sapiens


Alignment Length:203 Identity:65/203 - (32%)
Similarity:97/203 - (47%) Gaps:35/203 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAVQAGSVEEVFRSHQVVPDVIPEPPNQLLKVTYSNNLVAKD-------GVELTPTQVKDQPVVE 70
            ||...|...::|.....||.|    |   |.|.|:   |.:|       |.|:|||:....|.|.
Human   151 LAEYYGLYRDLFHGATFVPRV----P---LHVAYA---VGEDDLMPVYCGNEVTPTEAAQAPEVT 205

  Fly    71 WDAQPGEFYTLIMT-------DPDAPSRAEPKFREFKHWILANIAGNDLASGEPIAEYIGSGPPQ 128
            ::|:.|..:||::|       :|||         |:.||:|.||.||.:|.|:....|:...|.:
Human   206 YEAEEGSLWTLLLTSLDGHLLEPDA---------EYLHWLLTNIPGNRVAEGQVTCPYLPPFPAR 261

  Fly   129 GTGLHRYVFLLYKQSGKLEFDEE-RVSKRSRKDRPKFSAAKFAINH-ELGNPIAGTFYQAQYDDY 191
            |:|:||..|||:||...::|.|: |.|...:..:..|....|...| |...|...:|:|.::||.
Human   262 GSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQCRWDDS 326

  Fly   192 VPKLHKQL 199
            |..:..||
Human   327 VTYIFHQL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 51/160 (32%)
MRPL38NP_115867.2 PEBP_euk 171..321 CDD:176644 53/168 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.