DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17919 and mrpl38

DIOPT Version :10

Sequence 1:NP_649644.1 Gene:CG17919 / 40780 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_012814540.2 Gene:mrpl38 / 549900 XenbaseID:XB-GENE-5959674 Length:406 Species:Xenopus tropicalis


Alignment Length:201 Identity:61/201 - (30%)
Similarity:93/201 - (46%) Gaps:31/201 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAVQAGSVEEVFRSHQVVPDVI----PEPPNQLLKVTYSNNLVAKDGVELTPTQVKDQPVVEWDA 73
            :|...|..:::|.....||.|.    ....::.|...|..|||       ||.:....|.|.::|
 Frog   177 VAEHYGVFKDLFGDATFVPSVTLRVQYNKGDEFLMPVYHGNLV-------TPAEASGPPEVTFEA 234

  Fly    74 QPGEFYTLIMTDPDAPSRAEPKFREFKHWILANIAGNDLASGEPIAEYIGSGPPQGTGLHRYVFL 138
            :.|..:||::|:||...:....  |:..|::.||.||.:.|||.|..|....|.:|||.||::||
 Frog   235 EEGSLWTLLLTNPDGHLKETDS--EYVLWLVGNIPGNQVHSGEQICHYFPPFPAKGTGYHRHIFL 297

  Fly   139 LYKQSGKLEFDEERVSKRSRKDRPK---------FSAAKFAINHELGNPIAG-TFYQAQYDDYVP 193
            |:||..::||.:|.        ||.         |....|...:|.....|| .|:|..:||.|.
 Frog   298 LFKQDRRIEFKDEL--------RPNPCHSLKLRTFKTLDFYRKYEESLTPAGLAFFQCAWDDSVT 354

  Fly   194 KLHKQL 199
            :::.||
 Frog   355 QVYHQL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 49/154 (32%)
mrpl38XP_012814540.2 PEBP_euk 197..347 CDD:176644 50/166 (30%)

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