DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17917 and Pebp4

DIOPT Version :9

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_008769058.2 Gene:Pebp4 / 691997 RGDID:1593295 Length:235 Species:Rattus norvegicus


Alignment Length:147 Identity:42/147 - (28%)
Similarity:68/147 - (46%) Gaps:13/147 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 CGKVLEPMQVRDEPSVKWPSAPEN-YYALLMVDPDVPNAITPTHREFLHWMVLNIPGNLLALGDV 119
            |.:....:.....|.||:..|.:. .|.|:|||||.|:...|..:.:.||:|.||.|..:..|.:
  Rat    79 CNQYRRKIMTWQSPIVKFHGALDGAQYLLVMVDPDAPSRSNPRMKYWRHWVVSNITGTDMKSGSI 143

  Fly   120 R----VGYMGATPLKGTGTHRFVFLLYKQ--RDYTKFDFPKLPKHSVKGRSGFETKRFAKKYRFG 178
            |    ..|...||...||.||:.|.:|.|  ||.:      :|:...:.|..::..:|.::|...
  Rat   144 RGNIITDYQPPTPPPTTGLHRYQFFVYLQGDRDIS------IPESENENRGAWKLDKFLQQYGLQ 202

  Fly   179 HPVAGNFFTSQWSPDVP 195
            .|.....|.:|:..::|
  Rat   203 DPDTSTQFMTQFDGELP 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 40/138 (29%)
Pebp4XP_008769058.2 PEBP_euk 60..212 CDD:176644 40/138 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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