DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17917 and mrpl-38

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_490808.1 Gene:mrpl-38 / 171682 WormBaseID:WBGene00021327 Length:413 Species:Caenorhabditis elegans


Alignment Length:189 Identity:49/189 - (25%)
Similarity:74/189 - (39%) Gaps:22/189 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DTEVSKIMRSLDVIP----DVIHIGPQEFLNVTYHGHLAAHCGKVLEPMQVRDEPSVKWPSAPE- 78
            |.|...|.|...|..    |.|.....:.|.|.:...:..|.|.|:........|.:...|... 
 Worm   128 DVENLSIYRHFQVFDHLFGDNIFFENVQNLQVNFENDIVVHSGNVITANSTLKRPEITIESVGNG 192

  Fly    79 -NYYALLMVDPDVPNAI-TPTHREFLHWMVLNIP-GNLLALGDVRVGYMGATPLKGTGTHRFVFL 140
             .:..|||::.| .||: ...:.|.:.||:.||| |..::.|...:.|:...|..|||.||..|:
 Worm   193 GGFNTLLMINLD-GNALDLGKNGEIVQWMISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFV 256

  Fly   141 LYKQRDYTKFDFPKLPKHSVKGRS----GFETKRFAKKYRFG-HPVAGNFFTSQWSPDV 194
            |::......|        .::|.|    ..|..:|.||:... .|.|..||.:.:...|
 Worm   257 LFRHEKPVDF--------QIQGNSLDTRIHEISKFYKKHEATITPSAIRFFQTSYDNSV 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 41/152 (27%)
mrpl-38NP_490808.1 PEBP_euk 156..301 CDD:176644 41/153 (27%)

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