DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17917 and pebp4

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_005170845.3 Gene:pebp4 / 101882266 -ID:- Length:195 Species:Danio rerio


Alignment Length:158 Identity:46/158 - (29%)
Similarity:77/158 - (48%) Gaps:17/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LNVTYHGHLAAHCGKVLEPMQVRDEPSVKWPS--------APENYYALLMVDPDVPNAITPTHRE 100
            |.|.|...:...|  ::.|.::|::.|::|.|        ..|..|.|:|||||.|:...|:...
Zfish    39 LKVIYPDLVVDKC--LIVPQRMREKISMEWGSPEVLLPHAEEEKKYTLVMVDPDAPSRQNPSRSY 101

  Fly   101 FLHWMVLNIPGNLLALGDVR----VGYMGATPLKGTGTHRFVFLLYKQRDYTKFDFPKLPKHSVK 161
            :.||::::|.|..|..||||    ..|...||.||||.||:..|:::|.:...   |.|.:...:
Zfish   102 WRHWLLVDIKGEALQTGDVRGTELSAYARPTPPKGTGLHRYQILVFEQPEGRT---PFLNREENR 163

  Fly   162 GRSGFETKRFAKKYRFGHPVAGNFFTSQ 189
            .|..::.:.|.:::......|...|.:|
Zfish   164 SRGNWDLQAFIQRFGLSGAKASLQFLTQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 45/155 (29%)
pebp4XP_005170845.3 None

Return to query results.
Submit another query.