DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17917 and pebp4

DIOPT Version :10

Sequence 1:NP_649642.1 Gene:CG17917 / 40778 FlyBaseID:FBgn0037431 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_002932751.1 Gene:pebp4 / 100488878 XenbaseID:XB-GENE-941751 Length:202 Species:Xenopus tropicalis


Alignment Length:177 Identity:53/177 - (29%)
Similarity:79/177 - (44%) Gaps:40/177 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RSLDVI-PDVIHIG----------PQEFLNVTYHGHLAAHCGKVLEPMQVRDEPSVKWPSA-PEN 79
            :.|||| ||:..:.          |:..:                   :|.|.|.:::..| |..
 Frog    42 KDLDVIYPDIGRVSCIYIPNCFDFPRSLI-------------------KVWDYPLLRYSKAQPGL 87

  Fly    80 YYALLMVDPDVPNAITPTHREFLHWMVLNIPGNLLALGDVRVG-----YMGATPLKGTGTHRFVF 139
            .|.|:|||||.|:...|.:|.:.||::.:|||..|..|....|     |...:|..|||.||:.|
 Frog    88 KYVLIMVDPDAPSRWDPKYRYWRHWVLTDIPGWQLLSGRDLTGNDISAYRRPSPPPGTGYHRYQF 152

  Fly   140 LLYKQRDYTKFDFPKLPKHSVKGRSGFETKRFAKKYRFGHPVAGNFF 186
            .||:|..:....|  ||:..  .||.::.|.|.::.:.|.|||...|
 Frog   153 YLYEQPLWVILYF--LPEEI--RRSTWDLKAFVQRNKLGEPVATTQF 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17917NP_649642.1 PEBP_euk 44..188 CDD:176644 46/149 (31%)
pebp4XP_002932751.1 PEBP_euk 42..197 CDD:176644 53/177 (30%)

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