DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and prlh2r

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001108619.1 Gene:prlh2r / 797157 ZFINID:ZDB-GENE-120411-41 Length:371 Species:Danio rerio


Alignment Length:331 Identity:97/331 - (29%)
Similarity:163/331 - (49%) Gaps:25/331 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 MLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEIL-SKY 151
            :.|.:|.:|::....||.|::|.:.....:.:..|..|.|||:.||::||..:|||..... .:.
Zfish    36 LFIPLYTMLVLIACSGNLLLLILIGLNKKLHSTTNFLIGNLALVDLVMCLFCVPLTAFYAFDERG 100

  Fly   152 WPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVIVYP--TRDSLQFVGAVTILAGIWALA 214
            |.:|  ..:|..:.::|...:|.:.:|:||||.|||.|:.||  .|....|.|  .::..||..|
Zfish   101 WVFG--QFMCHFVTLMQTATVFAAVLSLTAIAVDRYVVVAYPIRRRGGRWFCG--WLVVSIWLCA 161

  Fly   215 LLLASPLFVYKELINTDTPALLQQIGLQDTIPYCIEDWPSRN-GRFYYSIFSLCVQYLVPILIVS 278
            |.:::|..::...::      |.:.|.:..:  |.|.|..:. .|..||.|.|.:.|.||:..||
Zfish   162 LAMSTPTALHTVYLD------LSETGHEMAV--CEEFWHGQELSRLIYSCFFLLLSYFVPLAAVS 218

  Fly   279 VAYFGIYNKLKSRITVVAVQASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADME 343
            ::|..|...|:.|.| ..:.|::...:.:.||:.::|..||:...:.|..|||||...||..|::
Zfish   219 ISYCAISCHLQHRAT-PRLMAATPSNQEKWGRKRRKTFRLLLVSVLSFAFSWLPLQIVNLIRDLD 282

  Fly   344 RSPVTQS---MLVRYAICHMIGMSSACSNPLLYGWLNDNF-----RKEFQELLCRCSDTNVALNG 400
            ......|   :.|....||::.|||||.||.:|..|:..|     ...||:....|:.:::..:.
Zfish   283 TDFAILSKNHVNVIQVSCHLLAMSSACYNPFIYASLHKKFLSYLCHNMFQKRKAHCTQSSITTSS 347

  Fly   401 HTTGCN 406
            ..|..|
Zfish   348 RMTRLN 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 92/307 (30%)
TM helix 1 88..114 CDD:320331 7/25 (28%)
TM helix 2 121..146 CDD:320331 12/24 (50%)
TM helix 3 161..191 CDD:320331 12/29 (41%)
TM helix 4 202..223 CDD:320331 6/20 (30%)
TM helix 5 258..287 CDD:320331 12/28 (43%)
TM helix 6 310..340 CDD:320331 12/29 (41%)
TM helix 7 352..377 CDD:320331 11/24 (46%)
prlh2rNP_001108619.1 7tmA_PrRP_R 35..326 CDD:320516 92/302 (30%)
TM helix 1 36..62 CDD:320516 7/25 (28%)
TM helix 2 69..94 CDD:320516 12/24 (50%)
TM helix 3 108..138 CDD:320516 12/29 (41%)
TM helix 4 149..170 CDD:320516 7/22 (32%)
TM helix 5 198..227 CDD:320516 12/28 (43%)
TM helix 6 249..279 CDD:320516 12/29 (41%)
TM helix 7 294..319 CDD:320516 11/24 (46%)

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