DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NPFR and prlhr2a

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001034615.1 Gene:prlhr2a / 654782 ZFINID:ZDB-GENE-060209-1 Length:370 Species:Danio rerio


Alignment Length:375 Identity:105/375 - (28%)
Similarity:184/375 - (49%) Gaps:50/375 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NTTAINTS-------DLNETGSRPLDPVLIDRFLSNRAVDSPWYHMLISMYGVLIVFGALGNTLV 107
            |.|..|:|       .|..|.|...:|    :|:....:.| :..::|..|.::::.|..||.|:
Zfish    20 NVTMENSSVGRIYEVMLQSTNSTKRNP----QFVGVELLQS-FKPLIIPCYALVVLVGVFGNYLL 79

  Fly   108 VIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILS-KYWPYGSCSILCKTIAMLQALC 171
            :..:.:...|....|.||.|||.||:|:|...:|.||....: :.|.:|  ..:|..:.::|.:.
Zfish    80 LYVICQTKKMHNVTNFFIGNLAFSDMLMCATCVPFTLAYAFNPRGWVFG--RFMCYLVFLIQPVT 142

  Fly   172 IFVSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAGIWALALLLASPLFVYKELINTDTPALL 236
            ::||..::|||..|||...|:|.:..:..:....:|:|||.|:..|.:|...:           .
Zfish   143 VYVSVFTLTAIGVDRYYATVHPLKKRISVLACTYLLSGIWILSCGLVAPAVAH-----------T 196

  Fly   237 QQIGLQD---TIPYCIEDWPSR-NGRFYYSIFSLCVQYLVPILIVSVAYFGIYNKLKSRITVVAV 297
            ..:..:|   ||  |.|.|..: ..|..|:..:|.:.|::|:..:.::|..|..||::  .||..
Zfish   197 YHVEFKDEGFTI--CEEFWMGQEKERLAYAYSTLFITYVLPLSALCISYLCISVKLRN--CVVPG 257

  Fly   298 QASSAQRKVERGRRMKRTNCLLISIAI-IFGVSWLPLNFFNLYADMERSPVTQS-MLVRYAICHM 360
            ..:.:|.:.:|.|  ||....|:|:.: .||:.|||::.||:..|::...:.:. .|:...:||:
Zfish   258 HRTQSQAEAQRAR--KRKTFRLVSLVVAAFGICWLPISVFNVLRDIDIDLIDKRYFLLIQLLCHL 320

  Fly   361 IGMSSACSNPLLYGWLNDNFRKEFQELL-C-----------RCSDTNVAL 398
            .||||:|.||.||.||:|.||.|.:::. |           .|:..:|.|
Zfish   321 CGMSSSCCNPFLYAWLHDRFRAELRKMFTCHRRIGIGIPANNCATASVVL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 90/302 (30%)
TM helix 1 88..114 CDD:320331 6/25 (24%)
TM helix 2 121..146 CDD:320331 13/24 (54%)
TM helix 3 161..191 CDD:320331 10/29 (34%)
TM helix 4 202..223 CDD:320331 7/20 (35%)
TM helix 5 258..287 CDD:320331 7/28 (25%)
TM helix 6 310..340 CDD:320331 12/30 (40%)
TM helix 7 352..377 CDD:320331 13/24 (54%)
prlhr2aNP_001034615.1 7tmA_PrRP_R 59..344 CDD:320516 90/303 (30%)
TM helix 1 60..86 CDD:320516 6/25 (24%)
TM helix 2 93..118 CDD:320516 13/24 (54%)
TM helix 3 132..162 CDD:320516 10/29 (34%)
TM helix 4 173..194 CDD:320516 7/20 (35%)
TM helix 5 220..249 CDD:320516 7/28 (25%)
TM helix 6 269..299 CDD:320516 12/31 (39%)
TM helix 7 312..337 CDD:320516 13/24 (54%)

Return to query results.
Submit another query.