DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and hcrtr2

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001073337.1 Gene:hcrtr2 / 561260 ZFINID:ZDB-GENE-070228-3 Length:424 Species:Danio rerio


Alignment Length:348 Identity:87/348 - (25%)
Similarity:165/348 - (47%) Gaps:58/348 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 WYHMLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILS 149
            |  :||:.|.::.:...:|||||..||.:...|||..|.||:||:.:|:|:.:..:|.:|:..::
Zfish    55 W--VLIAGYILVFLVSLVGNTLVCFAVWKNHHMRTVTNYFIVNLSFADILVTITCLPASLVVDIT 117

  Fly   150 KYWPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAGIWALA 214
            :.|.:|  ..|||.:..||.:.:.||.::::.||.||:..|.:|.:.......|...:..||.::
Zfish   118 ETWFFG--QTLCKILPYLQTISVSVSVLTLSCIAQDRWYAICHPLKFKSTAKRARKSIVLIWLVS 180

  Fly   215 LLLASPLFVYKELINTDTPALLQQIGLQDTIPYCIEDWPSRNGRFYYSIFSLC---VQYLVPILI 276
            .::..|..|..| .::..|.|..:..|   ...|.|.||.   ..|..::..|   |.|..|:.:
Zfish   181 CIMMIPQAVVME-SSSLMPELTNKTSL---FTVCDEQWPD---EIYPKVYHTCFFIVTYFAPLCL 238

  Fly   277 VSVAYFGIYNKL--------------------------------KSRITVVAVQASSAQRKVERG 309
            :.:||..|.:||                                |.|.:.|     ||:.|..:.
Zfish   239 MVLAYIQICHKLWCQQIPGSSSVLQRQWKSLQCSAHAVGSGESVKVRTSTV-----SAEAKQVKA 298

  Fly   310 RRMKRTNCLLISIAIIFGVSWLPLNFFNL----YADMERSPVTQSMLVRYAICHMIGMSSACSNP 370
            ||  :|..:|:.:..:|.:.:||::..|:    :...:.:...:::...:...|.:..:::.:||
Zfish   299 RR--KTARMLMVVLFVFALCYLPISILNIMKRVFGAFKNTGNRETVYAWFTFSHWLIYANSAANP 361

  Fly   371 LLYGWLNDNFRKEFQ-ELLCRCS 392
            ::|.:|:..||:||: ..:|:||
Zfish   362 IIYNFLSGKFREEFKAAFICQCS 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 81/334 (24%)
TM helix 1 88..114 CDD:320331 10/25 (40%)
TM helix 2 121..146 CDD:320331 9/24 (38%)
TM helix 3 161..191 CDD:320331 10/29 (34%)
TM helix 4 202..223 CDD:320331 4/20 (20%)
TM helix 5 258..287 CDD:320331 8/31 (26%)
TM helix 6 310..340 CDD:320331 8/33 (24%)
TM helix 7 352..377 CDD:320331 4/24 (17%)
hcrtr2NP_001073337.1 7tmA_OXR 55..375 CDD:320336 82/337 (24%)
TM helix 1 56..82 CDD:320336 10/25 (40%)
TM helix 2 89..115 CDD:320336 9/25 (36%)
TM helix 3 127..157 CDD:320336 10/29 (34%)
TM helix 4 168..189 CDD:320336 4/20 (20%)
TM helix 5 220..249 CDD:320336 7/28 (25%)
TM helix 6 297..327 CDD:320336 8/31 (26%)
TM helix 7 343..368 CDD:320336 4/24 (17%)
Orexin_rec2 390..>424 CDD:427531
Blue background indicates that the domain is not in the aligned region.

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