DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and sNPF-R

DIOPT Version :9

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster


Alignment Length:492 Identity:149/492 - (30%)
Similarity:225/492 - (45%) Gaps:92/492 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GTVHALNTTAINTSDLNETGSRPLDPVLIDRFLSNRAVDSPWYHMLISMYGVLIVFGALGNTLVV 108
            ||..|: ...:..||.:.:|.          .:.|:.|...:|    .:|..:.|.|..||.||.
  Fly    36 GTTSAI-LADVAASDEDRSGG----------IIHNQFVQIFFY----VLYATVFVLGVFGNVLVC 85

  Fly   109 IAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILSKYWPYGSCSILCKTIAMLQALCIF 173
            ..|:|...|:|..|:||.|||:||:|||::.:|.|.:......|.:|..  ||..::..|...|:
  Fly    86 YVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGRS--LCHLVSFAQGCSIY 148

  Fly   174 VSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAGIWALALLLASPLFVY----KELIN----- 229
            :||:::|:||.|||.||:||....::....:.|:..||.:|||...|..:|    .||:|     
  Fly   149 ISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPYGMYMKMTNELVNGTQTG 213

  Fly   230 -----------------------------TDTPALLQQIGLQDTIP-------YCIEDWPSRNGR 258
                                         :.|.|.:|.:....|.|       ||.|:|||...|
  Fly   214 NETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMPYVRVYCEENWPSEQYR 278

  Fly   259 FYYSIFSLCVQYLVPILIVSVAYFGIYNKLKSRITVVAVQASSAQRKVERGRRMKRTNCLLISIA 323
            ..:...:..:|:::|..|:|:.|..|..||..|........||.:.:.:|.|: ||||.:||::.
  Fly   279 KVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSSRREEADRDRK-KRTNRMLIAMV 342

  Fly   324 IIFGVSWLPLNFFNLYADM-ERSPVTQSMLVRYAICHMIGMSSACSNPLLYGWLNDNFRKEFQEL 387
            .:||:||||:|..|::.|. ::|...:..::.:.:.|.|.|||.|.||.||.|||:||||||:.:
  Fly   343 AVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHV 407

  Fly   388 LCRCSDTNVALNGHTTGCNVQAAARRRRKLGAELSKGELKLLGPGGAQSGTAGGEGGLAATDFMT 452
            |...:.:|..:...|.|.|    ...|...|..|..|:    |.||.      |.|.|.|.|   
  Fly   408 LPCFNPSNNNIINITRGYN----RSDRNTCGPRLHHGK----GDGGM------GGGSLDADD--- 455

  Fly   453 GHHEGGLRSAITESVALTDHNPVPSEVTKLMPRLEQY 489
             ..|.|    ||:...|      |.|...::||...|
  Fly   456 -QDENG----ITQETCL------PKEKLLIIPREPTY 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tm_4 98..>195 CDD:304433 41/96 (43%)
7tm_1 103..373 CDD:278431 99/315 (31%)
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 47/122 (39%)
7tm_1 80..393 CDD:278431 99/315 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25205at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41034
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

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