DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NPFR and Galr2

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_062045.1 Gene:Galr2 / 29234 RGDID:2657 Length:372 Species:Rattus norvegicus


Alignment Length:404 Identity:103/404 - (25%)
Similarity:176/404 - (43%) Gaps:97/404 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 AINTSDLNETGSRPLDPVLIDRFLSNRAVDSPWYHMLISMYGVLIVFGALGNTLVVIAVIRKPIM 117
            |.|||....:|....:.||:..|                 :.::.:.|.:||.||:..::|....
  Rat     9 AENTSQEGGSGGWQPEAVLVPLF-----------------FALIFLVGTVGNALVLAVLLRGGQA 56

  Fly   118 RTARNLFILNLAISDL--LLCLVTMPLTLMEILSKYWPYGSCSILCKTIAMLQALCIFVSTISIT 180
            .:..|||||||.::||  :||.|....|:..:  ..|.:|  |:|||.:..|..|.:..|:.::.
  Rat    57 VSTTNLFILNLGVADLCFILCCVPFQATIYTL--DDWVFG--SLLCKAVHFLIFLTMHASSFTLA 117

  Fly   181 AIAFDRYQVIVYP--------TRDSLQFVGAVTILAGIWALALLLASPLFVY---KELINTDTPA 234
            |::.|||..|.||        .|::|..:|.      ||.||||.:.|...|   .:|.|     
  Rat   118 AVSLDRYLAIRYPLHSRELRTPRNALAAIGL------IWGLALLFSGPYLSYYRQSQLAN----- 171

  Fly   235 LLQQIGLQDTIPYCIEDWPSRNGRFYYSIFSLCV---QYLVPILIVSVAYFGIYNKLKSRITVVA 296
                      :..|...|.:...|    ...||.   .||:|:|::|:.|......|...:..|.
  Rat   172 ----------LTVCHPAWSAPRRR----AMDLCTFVFSYLLPVLVLSLTYARTLRYLWRTVDPVT 222

  Fly   297 VQASS--AQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQSMLVRYAICH 359
            ..:.|  |:|||.|         ::|.:|::|.:.|:|.:...|.....|.|:|::......:.|
  Rat   223 AGSGSQRAKRKVTR---------MIIIVAVLFCLCWMPHHALILCVWFGRFPLTRATYALRILSH 278

  Fly   360 MIGMSSACSNPLLYGWLNDNFRKEFQELLCRCSDTNVALNGHTTGCNVQAAARRRRKLGAELSKG 424
            ::..:::|.||::|..::.:|||.|:::   |:..            ::.|.||        :.|
  Rat   279 LVSYANSCVNPIVYALVSKHFRKGFRKI---CAGL------------LRPAPRR--------ASG 320

  Fly   425 ELKLLGPGGAQSGT 438
            .:.:|.||. .||:
  Rat   321 RVSILAPGN-HSGS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 84/313 (27%)
TM helix 1 88..114 CDD:320331 5/25 (20%)
TM helix 2 121..146 CDD:320331 13/26 (50%)
TM helix 3 161..191 CDD:320331 9/29 (31%)
TM helix 4 202..223 CDD:320331 8/20 (40%)
TM helix 5 258..287 CDD:320331 9/31 (29%)
TM helix 6 310..340 CDD:320331 6/29 (21%)
TM helix 7 352..377 CDD:320331 5/24 (21%)
Galr2NP_062045.1 7tmA_Gal2_Gal3_R 26..303 CDD:320225 87/331 (26%)
TM helix 1 27..53 CDD:320225 7/42 (17%)
TM helix 2 60..86 CDD:320225 13/25 (52%)
TM helix 3 98..128 CDD:320225 9/29 (31%)
TM helix 4 140..160 CDD:320225 9/25 (36%)
TM helix 5 184..213 CDD:320225 9/32 (28%)
TM helix 6 229..259 CDD:320225 11/38 (29%)
TM helix 7 271..296 CDD:320225 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..372
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.