DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NPFR and Npy5r

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_037001.1 Gene:Npy5r / 25340 RGDID:3199 Length:445 Species:Rattus norvegicus


Alignment Length:413 Identity:103/413 - (24%)
Similarity:178/413 - (43%) Gaps:113/413 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 AVDSPWYHMLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTL 144
            :||...| .||.:|..:.:.|.:||.|:::||::|...:|..|..|.|||.||:|:.|...|.||
  Rat    36 SVDDLQY-FLIGLYTFVSLLGFMGNLLILMAVMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTL 99

  Fly   145 MEILSKYWPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAG 209
            ..:|...|.:|..  :|..:..||.:.:.|||:.:.:||..||.:|.:|..::|.......::|.
  Rat   100 TSVLLDQWMFGKA--MCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLIAT 162

  Fly   210 IWALALLLASPLFVYKELI---NTDTPALLQQIGLQDTIPYCIEDWPSRNGRFYYSIFSLCVQYL 271
            :|.|...:.|||.|:..|:   .|...|||....|      |:|.|||.:.|..::|..|.|||:
  Rat   163 VWTLGFAICSPLPVFHSLVELKETFGSALLSSKYL------CVESWPSDSYRIAFTISLLLVQYI 221

  Fly   272 VPILIVSVAYFGI-----------YNKLKSRITV-VAVQASSAQR----------------KVER 308
            :|::.::|::..:           .|:|:....: :.:|.|...|                :..|
  Rat   222 LPLVCLTVSHTSVCRSISCGLSHKENRLEENEMINLTLQPSKKSRNQAKTPSTQKWSYSFIRKHR 286

  Fly   309 GRRMKRTNCLLIS---------------------------------------------------- 321
            .|..|:|.|:|.:                                                    
  Rat   287 RRYSKKTACVLPAPAGPSQGKHLAVPENPASVRSQLSPSSKVIPGVPICFEVKPEESSDAHEMRV 351

  Fly   322 --------------------IAIIFGVSWLPLNFFNLYADMERSPVT-QSMLVRYAICHMIGMSS 365
                                :.::|.|||:||:.|::..|...:.:: :...:.|.|||::||.|
  Rat   352 KRSITRIKKRSRSVFYRLTILILVFAVSWMPLHVFHVVTDFNDNLISNRHFKLVYCICHLLGMMS 416

  Fly   366 ACSNPLLYGWLNDNFRKEFQELL 388
            .|.||:|||:||:..:.:.:.|:
  Rat   417 CCLNPILYGFLNNGIKADLRALI 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 99/399 (25%)
TM helix 1 88..114 CDD:320331 9/25 (36%)
TM helix 2 121..146 CDD:320331 12/24 (50%)
TM helix 3 161..191 CDD:320331 10/29 (34%)
TM helix 4 202..223 CDD:320331 6/20 (30%)
TM helix 5 258..287 CDD:320331 8/39 (21%)
TM helix 6 310..340 CDD:320331 12/101 (12%)
TM helix 7 352..377 CDD:320331 13/24 (54%)
Npy5rNP_037001.1 7tmA_NPY5R 42..435 CDD:320520 100/401 (25%)
TM helix 1 43..69 CDD:320520 9/25 (36%)
TM helix 2 76..101 CDD:320520 12/24 (50%)
TM helix 3 114..144 CDD:320520 10/29 (34%)
TM helix 4 155..176 CDD:320520 6/20 (30%)
TM helix 5 208..237 CDD:320520 8/28 (29%)
TM helix 6 360..390 CDD:320520 7/29 (24%)
TM helix 7 403..428 CDD:320520 13/24 (54%)

Return to query results.
Submit another query.