DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and Tacr3

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_058749.1 Gene:Tacr3 / 24808 RGDID:3810 Length:452 Species:Rattus norvegicus


Alignment Length:374 Identity:94/374 - (25%)
Similarity:147/374 - (39%) Gaps:65/374 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LGTVHALNTTAINTSDLNETGSRPLDPVLIDRFLSNRAVDSPWYHMLISM-YGVLIVFGALGNTL 106
            ||....|...|.|.|......:....|..:...|:|:.|...|...|.|: ||:::.....||.:
  Rat    28 LGVTEWLALQAGNFSSALGLPATTQAPSQVRANLTNQFVQPSWRIALWSLAYGLVVAVAVFGNLI 92

  Fly   107 VVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILSKYWPYGSCSILCKTIAMLQALC 171
            |:..::....|||..|.|::|||.||..:......:..:..|...|.:|  :..|:.........
  Rat    93 VIWIILAHKRMRTVTNYFLVNLAFSDASVAAFNTLINFIYGLHSEWYFG--ANYCRFQNFFPITA 155

  Fly   172 IFVSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAGIWALALLLASPLFVYKELINTDTPALL 236
            :|.|..|:||||.|||..|:.|.:..|.......::..||.||.|||.|..:|.::         
  Rat   156 VFASIYSMTAIAVDRYMAIIDPLKPRLSATATKIVIGSIWILAFLLAFPQCLYSKI--------- 211

  Fly   237 QQIGLQDTIP---YCIEDWP-SRNGRFYYSIFSLCVQYLVPILIVSVAYFGIYNKLKSRITVVAV 297
                  ..:|   .|...|| .....|.|.|..:.:.|..|:||:.|.|           |:|.:
  Rat   212 ------KVMPGRTLCYVQWPEGPKQHFTYHIIVIILVYCFPLLIMGVTY-----------TIVGI 259

  Fly   298 ----------------QASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFF----NLYADM 342
                            :...|:|||.:         ::|.:.:.|.:.|||.:.:    .:|..:
  Rat   260 TLWGGEIPGDTCDKYHEQLKAKRKVVK---------MMIIVVVTFAICWLPYHVYFILTAIYQQL 315

  Fly   343 ERSPVTQSMLVRYAICHMIGMSSACSNPLLYGWLNDNFRKEFQELLCRC 391
            .|....|.:   |.....:.|||...||::|..||..||..|:.....|
  Rat   316 NRWKYIQQV---YLASFWLAMSSTMYNPIIYCCLNKRFRAGFKRAFRWC 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 81/320 (25%)
TM helix 1 88..114 CDD:320331 7/26 (27%)
TM helix 2 121..146 CDD:320331 7/24 (29%)
TM helix 3 161..191 CDD:320331 11/29 (38%)
TM helix 4 202..223 CDD:320331 8/20 (40%)
TM helix 5 258..287 CDD:320331 9/28 (32%)
TM helix 6 310..340 CDD:320331 5/33 (15%)
TM helix 7 352..377 CDD:320331 7/24 (29%)
Tacr3NP_058749.1 7tmA_NKR_NK3R 73..354 CDD:320669 81/320 (25%)
TM helix 1 74..100 CDD:320669 7/25 (28%)
TM helix 2 107..133 CDD:320669 7/25 (28%)
TM helix 3 145..175 CDD:320669 11/29 (38%)
TM helix 4 186..207 CDD:320669 8/20 (40%)
TM helix 5 231..260 CDD:320669 11/39 (28%)
TM helix 6 279..309 CDD:320669 9/38 (24%)
TM helix 7 322..347 CDD:320669 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..452
Blue background indicates that the domain is not in the aligned region.

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