DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and Hcrtr1

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_945197.2 Gene:Hcrtr1 / 230777 MGIID:2385650 Length:416 Species:Mus musculus


Alignment Length:339 Identity:87/339 - (25%)
Similarity:168/339 - (49%) Gaps:41/339 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 WYHMLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILS 149
            |  :||:.|..:.:...:|||||.:||.|...|||..|.||:||:::|:|:..:.:|.:|:..::
Mouse    47 W--VLIAAYVAVFLIALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDIT 109

  Fly   150 KYWPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAGIWALA 214
            :.|.:|..  |||.|..|||:.:.|:.::::.||.||:..|.:|.........|...:.||||::
Mouse   110 ESWLFGQA--LCKVIPYLQAVSVSVAVLTLSFIALDRWYAICHPLLFKSTARRARGSILGIWAVS 172

  Fly   215 LLLASPLFVYKELINTDTPALLQQIGLQDTIPYCIEDWPSR-NGRFYYSIFSLCVQYLVPILIVS 278
            |.:..|.....| .::..|.|..:..|   ...|.|.|... ..:.|:|.|.: |.||.|:.:::
Mouse   173 LAVMVPQAAVME-CSSVLPELANRTRL---FSVCDEHWADELYPKIYHSCFFI-VTYLAPLGLMA 232

  Fly   279 VAYFGIYNKLKSR---------------------------ITVVAVQASSAQRKVERGRRMKRTN 316
            :|||.|:.||..|                           .|....:|.:...:|::.|..::|.
Mouse   233 MAYFQIFRKLWGRQIPGTTSALVRNWKRPSEQLEAQHQGLCTEPQPRARAFLAEVKQMRARRKTA 297

  Fly   317 CLLISIAIIFGVSWLPLNFFN----LYADMERSPVTQSMLVRYAICHMIGMSSACSNPLLYGWLN 377
            .:|:.:.::|.:.:||::..|    ::....::...:::...:...|.:..:::.:||::|.:|:
Mouse   298 KMLMVVLLVFALCYLPISVLNVLKRVFGMFRQASDREAVYACFTFSHWLVYANSAANPIIYNFLS 362

  Fly   378 DNFRKEFQELLCRC 391
            ..||::|:.....|
Mouse   363 GKFREQFKAAFSCC 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 84/327 (26%)
TM helix 1 88..114 CDD:320331 10/25 (40%)
TM helix 2 121..146 CDD:320331 9/24 (38%)
TM helix 3 161..191 CDD:320331 11/29 (38%)
TM helix 4 202..223 CDD:320331 7/20 (35%)
TM helix 5 258..287 CDD:320331 11/28 (39%)
TM helix 6 310..340 CDD:320331 7/33 (21%)
TM helix 7 352..377 CDD:320331 4/24 (17%)
Hcrtr1NP_945197.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43613 26..41
7tmA_OXR 47..369 CDD:320336 85/330 (26%)
TM helix 1 48..74 CDD:320336 10/25 (40%)
TM helix 2 81..107 CDD:320336 9/25 (36%)
TM helix 3 119..149 CDD:320336 11/29 (38%)
TM helix 4 160..181 CDD:320336 7/20 (35%)
TM helix 5 212..241 CDD:320336 11/29 (38%)
TM helix 6 291..321 CDD:320336 7/29 (24%)
TM helix 7 337..362 CDD:320336 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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