DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and npr-28

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_509416.2 Gene:npr-28 / 181089 WormBaseID:WBGene00018886 Length:518 Species:Caenorhabditis elegans


Alignment Length:525 Identity:114/525 - (21%)
Similarity:207/525 - (39%) Gaps:139/525 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LNTTAINTSDLNETGSRPLDPVLIDRFLSNRAVDSPWYHMLIS-MYGVLIVFGALGNTLVVIAVI 112
            :::|:|.|: ::.|.|..:.|.|      |..::..:..|.:. :|..|.|.|..||..|:|.||
 Worm     6 ISSTSILTT-VSTTTSSTIVPSL------NDPMEIQFEIMFVMVLYSCLAVTGVGGNCWVLIKVI 63

  Fly   113 R-------------KPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILSKYWPYGSCSILCKTI 164
            :             |.:::::..::::.|::.| |..|:.:|:.:.::...::|:|..:  ||..
 Worm    64 KQLSGCSSNRSRPYKTVVQSSAYVYLIILSVVD-LFSLIPVPMIVTDVYVNHFPFGLWA--CKLS 125

  Fly   165 AMLQALCIFVSTISITAIAFDRYQVIVYPTRDSLQFVG-AVTILAGIWALALLLASP------LF 222
            ...:|:...:|.:.:||::.|||..:.:||...|:... ::.:||..::::|:...|      :.
 Worm   126 YFCEAINKSLSPMVLTALSVDRYIAVCHPTLYWLRTTKFSLGVLAVCFSVSLIFIIPVTKKATMQ 190

  Fly   223 VYKELINTDTPALLQQIGLQDTIPYCIEDWPSRNGRFYYSIFSLCVQYLVPILIVSVAYFGIYNK 287
            |.|:  |||           :.|..|..| ...:..:.:......|.||||:.|:...|..|.:|
 Worm   191 VMKD--NTD-----------EEIIKCAFD-HGDSASYVFDTAQAIVCYLVPLFIICAVYLAILHK 241

  Fly   288 L--KSRITVVAVQASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPL----------------- 333
            |  .:|.:.|..:.|     :..||.:|   |.::.:|..| :.|.|.                 
 Worm   242 LFIHTRFSTVGKKTS-----ISLGRVVK---CSVMVVAFYF-ICWTPYWTMRIHYLVTRFIETNS 297

  Fly   334 -------------------------NFFNLYADMERSPVTQSMLVRYAICHMIGMSSACSNPLLY 373
                                     .||.|.:......:..:::.   |.|.:..:.:..|.|.|
 Worm   298 DGNSTVIDEVVAAVAEEVQDGIETSYFFGLISKKRMHNIEIALIY---ILHSLTYAQSAFNWLFY 359

  Fly   374 GWLNDNFRKEFQELLCR------CSDTNVALNGHTTGC----------NVQAAARRRRKLGAELS 422
            .:||.|.|....    |      .::|:|..||:.|..          |:|......:..|.:..
 Worm   360 SFLNRNLRSNNG----RGNGTRSAANTSVFDNGNATSTVNTSLTPIWKNIQQMGSHIKTAGLDTR 420

  Fly   423 KGELK---LLGPGGAQSGTAGGEGGLAATDFMTGHHEGGLR--SAITESVALTDHNPVPSEVTKL 482
            ...:|   ..|....||.:|      |..|..:.|.   ||  |..|.|.:|.|....||    |
 Worm   421 SALMKKSPFKGKSKIQSRSA------AYLDCSSAHM---LRPSSENTLSSSLLDIPRRPS----L 472

  Fly   483 MPRLE 487
            :||.|
 Worm   473 IPRQE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 76/360 (21%)
TM helix 1 88..114 CDD:320331 11/39 (28%)
TM helix 2 121..146 CDD:320331 5/24 (21%)
TM helix 3 161..191 CDD:320331 9/29 (31%)
TM helix 4 202..223 CDD:320331 4/27 (15%)
TM helix 5 258..287 CDD:320331 8/28 (29%)
TM helix 6 310..340 CDD:320331 10/71 (14%)
TM helix 7 352..377 CDD:320331 5/24 (21%)
npr-28NP_509416.2 7tm_classA_rhodopsin-like 41..363 CDD:410626 71/350 (20%)
TM helix 1 41..72 CDD:410626 10/30 (33%)
TM helix 2 85..110 CDD:410626 5/25 (20%)
TM helix 3 122..152 CDD:410626 9/29 (31%)
TM helix 4 164..183 CDD:410626 3/18 (17%)
TM helix 5 212..237 CDD:410626 7/24 (29%)
TM helix 6 257..287 CDD:410626 8/33 (24%)
TM helix 7 338..363 CDD:410626 5/27 (19%)

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