DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and ckr-2

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001367973.1 Gene:ckr-2 / 175341 WormBaseID:WBGene00021439 Length:603 Species:Caenorhabditis elegans


Alignment Length:356 Identity:79/356 - (22%)
Similarity:158/356 - (44%) Gaps:81/356 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ADGEHLSGYASSSNSVRYLDDRHPLDYLDLGTVHALNTTAINTSDLNETGSRPLDPVLIDRFLSN 78
            ||.|:::.| .:.||..:|:..:......:.|:::..:|.::|....|          |.||...
 Worm     4 ADDENITNY-DTMNSSSFLELLNATSPPPIWTLNSNLSTTMSTVHQEE----------ICRFRGT 57

  Fly    79 RAVDSPWYHMLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLT 143
                :..|.:.::.: ::.:...:||::|:|.:|::..||:..|::::|||.||::|.:|.||.|
 Worm    58 ----TENYTIAVTFF-MIFLLSVVGNSVVLIVIIKQRAMRSITNIYLMNLAASDMMLSVVCMPPT 117

  Fly   144 LMEILSKYWPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVI-------VYPTRDSLQFV 201
            |:.::...|.:|  :.:||.:|.||.:.:..|..::..|||:||..|       ::.||..    
 Worm   118 LVSMVMNCWMFG--NYMCKILAYLQPVVVTASAYTLAVIAFERYFAICKPLHSRIWQTRSH---- 176

  Fly   202 GAVTILAGIWALAL---LLASPLFVYKELINTDTPALLQQIGLQDTIPYCIEDWPSRNG------ 257
             |..::..:|.:|:   :|.  ||:|:                |.|.        |.||      
 Worm   177 -AYAMITLVWVIAIAANILM--LFMYE----------------QQTY--------SSNGYTCAPI 214

  Fly   258 -----RFYYSIFSLCVQYLVPILIVSVAYFGIYNKLKS--RITVVAVQASSAQRKVERGRRMKR- 314
                 .|.|.::...|..::|:::::..|..:...|||  ::.:.:|....|.......:.:.. 
 Worm   215 HPPIYHFAYQVYMTVVLLVIPLVVMAGLYGNVITSLKSGIKLEIASVDPPLATATTTGAKNLGSH 279

  Fly   315 --------TNCLLISIAIIFGVSWLPLNFFN 337
                    .|.|:.|..:....|.:.||.|:
 Worm   280 SDSAHLLLNNVLVGSSQLARATSCIALNTFS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 64/282 (23%)
TM helix 1 88..114 CDD:320331 5/25 (20%)
TM helix 2 121..146 CDD:320331 12/24 (50%)
TM helix 3 161..191 CDD:320331 12/36 (33%)
TM helix 4 202..223 CDD:320331 5/23 (22%)
TM helix 5 258..287 CDD:320331 5/28 (18%)
TM helix 6 310..340 CDD:320331 7/37 (19%)
TM helix 7 352..377 CDD:320331
ckr-2NP_001367973.1 7tmA_CCKR-like 61..508 CDD:320124 65/284 (23%)
TM helix 1 62..88 CDD:320124 5/26 (19%)
TM helix 2 95..121 CDD:320124 12/25 (48%)
TM helix 3 133..163 CDD:320124 11/29 (38%)
TM helix 4 177..195 CDD:320124 3/17 (18%)
TM helix 5 220..245 CDD:320124 5/24 (21%)
TM helix 6 430..460 CDD:320124
TM helix 7 476..501 CDD:320124
Blue background indicates that the domain is not in the aligned region.

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