DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NPFR and XB994602

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:XP_002940541.3 Gene:XB994602 / 100497124 XenbaseID:XB-GENE-994603 Length:364 Species:Xenopus tropicalis


Alignment Length:339 Identity:92/339 - (27%)
Similarity:165/339 - (48%) Gaps:40/339 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 MLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEIL-SKY 151
            :.|.:|.:|:....|||..:::.:.....:....|..|.|||::||::|:..:|||..... ::.
 Frog    33 LFIPIYALLVTVACLGNCALILLIALTKKLHNTTNFLIGNLALADLVMCIFCVPLTASYAFENRG 97

  Fly   152 WPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVIVYPTRDSLQFVGAVTILAGIWALALL 216
            |.:|  ..:|..:.::||..:.||.:|:||||.|||.|:|||.|..:.....:.|::.:|.:::.
 Frog    98 WLFG--EFMCHFVTLMQAATVCVSVLSLTAIAVDRYVVVVYPIRRRIGCRSCIYIVSLVWLVSIG 160

  Fly   217 LASPLFVYKELINTDTPALLQQIGLQDTIPYCIEDWPSR-NGRFYYSIFSLCVQYLVPILIVSVA 280
            ::.|.|.:...::      |:..| .|.| .|.|.|.:: ..|..||...|.:.|::|:..::::
 Frog   161 ISMPTFFHTHYLD------LKSAG-HDMI-ICEEFWRNQEKQRLLYSCSLLLLYYMLPLSAITIS 217

  Fly   281 YFGIYNKLKSRITVVAVQASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERS 345
            |..|...|:.|    .|..:::..:.:..::.::|..:|....:.||:.||||...||..|::. 
 Frog   218 YCAIAYHLRKR----NVPGATSHNQDKWSKKKQKTFRMLSISVMAFGICWLPLQILNLIRDIDE- 277

  Fly   346 PVTQSMLVRYAI------------CHMIGMSSACSNPLLYGWLNDNFRKEFQELLC---RCSDTN 395
                    .:||            ||:|.|||||.||.:|..|:|.||...:....   |.::|.
 Frog   278 --------EFAILDKNYINVIQVTCHLIAMSSACYNPFIYASLHDKFRFHLRNYFFHHKRRANTM 334

  Fly   396 VALNGHTTGCNVQA 409
            ...|.....|:..|
 Frog   335 STKNSRHNTCSTLA 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 87/309 (28%)
TM helix 1 88..114 CDD:320331 6/25 (24%)
TM helix 2 121..146 CDD:320331 11/24 (46%)
TM helix 3 161..191 CDD:320331 14/29 (48%)
TM helix 4 202..223 CDD:320331 3/20 (15%)
TM helix 5 258..287 CDD:320331 8/28 (29%)
TM helix 6 310..340 CDD:320331 10/29 (34%)
TM helix 7 352..377 CDD:320331 13/36 (36%)
XB994602XP_002940541.3 7tm_GPCRs 32..320 CDD:475119 87/309 (28%)
TM helix 1 34..58 CDD:320516 6/23 (26%)
TM helix 2 67..89 CDD:320516 10/21 (48%)
TM helix 3 106..128 CDD:320516 8/21 (38%)
TM helix 4 149..165 CDD:320516 2/15 (13%)
TM helix 5 196..219 CDD:320516 5/22 (23%)
TM helix 6 249..271 CDD:320516 7/21 (33%)
TM helix 7 288..313 CDD:320516 11/24 (46%)

Return to query results.
Submit another query.