DRSC/TRiP Functional Genomics Resources

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Protein Alignment NPFR and cckbrb

DIOPT Version :10

Sequence 1:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster
Sequence 2:XP_017213239.2 Gene:cckbrb / 100331465 ZFINID:ZDB-GENE-201012-1 Length:442 Species:Danio rerio


Alignment Length:414 Identity:100/414 - (24%)
Similarity:178/414 - (42%) Gaps:103/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LNTTAI-------NTSDLNETGSRPL--------DPVLIDRFLSNRA--VDSPWYHMLISMYGVL 96
            ||.|.|       |.|.||.:.:..|        |.:|:.:....||  :||    :.|.:|.::
Zfish     6 LNDTGIWACLQLHNASILNRSSNGSLEVPNGTCEDALLLPKIEPARAKEMDS----LRILLYCLI 66

  Fly    97 IVFGALGNTLVVIAVIRKPIMRTARNLFILNLAISDLLLCLVTMPLTLMEILSKYWPYGSCSILC 161
            .:....||.|:::.::....|||..|.|:|:||||||::.:|.||.||:..|...:.:|:.  :|
Zfish    67 FLLSVFGNLLIIVVLMVNKRMRTVTNSFLLSLAISDLMMAVVCMPFTLIPNLMGDFIFGAA--MC 129

  Fly   162 KTIAMLQALCIFVSTISITAIAFDRYQVIVYP-------TRDSLQFVGAVTILAGIWALALLLAS 219
            |.:|.|..:.:.:||.|:.|||.:||..|..|       ||..     |..::|..|.::.|:.:
Zfish   130 KIVAYLMGISVCISTFSLVAIAIERYSAICNPLKSRAWQTRSH-----AYKVIASTWVVSFLIMT 189

  Fly   220 PLFVYKELI-----NTDTPALLQQIGLQDTIPYCIEDWPSRNGRFYYSIFSLCVQYLVPILIVSV 279
            |..::..|:     |..|..:            |..||.:......:.|..|.|.:.:|.:::.:
Zfish   190 PYPIFSTLVEFTKNNNITGHM------------CRHDWMNSEVEKAWCILLLFVLFFIPGVVMII 242

  Fly   280 AY---------------------FGIYNKLKSRITVVA-------VQAS-------------SAQ 303
            ||                     .|:.|.:.:.:.:.:       :|.|             :..
Zfish   243 AYGLISRELYRGIQFELEQKKGQCGMKNGISATVLISSDDGDGCYIQVSKRPNSMEMSALTPTGS 307

  Fly   304 RKVERGR---------RMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQSML-VRYAIC 358
            .||:|.|         ..||...:||.|..:|.:.|:|:...|.:...:.:...:::. ...:..
Zfish   308 AKVDRPRSNTSEAKLMAKKRVIRMLIVIVAMFFICWMPVYSVNTWKAFDLASAHRALSGAPISFI 372

  Fly   359 HMIGMSSACSNPLLYGWLNDNFRK 382
            |::..:|||.||::|.::|..|||
Zfish   373 HLLSYTSACVNPIIYCFMNKRFRK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 85/358 (24%)
TM helix 1 88..114 CDD:320331 5/25 (20%)
TM helix 2 121..146 CDD:320331 14/24 (58%)
TM helix 3 161..191 CDD:320331 12/29 (41%)
TM helix 4 202..223 CDD:320331 5/20 (25%)
TM helix 5 258..287 CDD:320331 7/49 (14%)
TM helix 6 310..340 CDD:320331 10/38 (26%)
TM helix 7 352..377 CDD:320331 7/25 (28%)
cckbrbXP_017213239.2 None

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