DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha14-2 and Atp6v1f

DIOPT Version :10

Sequence 1:NP_649614.1 Gene:Vha14-2 / 40748 FlyBaseID:FBgn0037402 Length:129 Species:Drosophila melanogaster
Sequence 2:NP_446336.1 Gene:Atp6v1f / 116664 RGDID:621552 Length:119 Species:Rattus norvegicus


Alignment Length:73 Identity:42/73 - (57%)
Similarity:58/73 - (79%) Gaps:0/73 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 DTTPKQIEECFKKFLRRPDIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQHPYDSSRDSIL 115
            |||..:||:.|::||.|.||.||||||..|:|:|..:|||..::|.|||||||:||||:::||||
  Rat    42 DTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSIL 106

  Fly   116 KRAQRVIT 123
            :||:.:.|
  Rat   107 RRAKGMFT 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha14-2NP_649614.1 PRK03957 <51..124 CDD:469852 42/73 (58%)
Atp6v1fNP_446336.1 V_ATP_synt_F 1..115 CDD:130171 42/73 (58%)

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