DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp57c

DIOPT Version :10

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_611481.1 Gene:Obp57c / 37311 FlyBaseID:FBgn0034509 Length:149 Species:Drosophila melanogaster


Alignment Length:134 Identity:31/134 - (23%)
Similarity:58/134 - (43%) Gaps:17/134 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MKSGILIALCLCLSLNEGLALLEHEGETINRCIQNYGGLTAENAERLERFKEWSDSYE----EIP 63
            :|..::..|.:.:...:.|:||| |...::.|:.:.....||..|.::|.....|..|    ...
  Fly     2 LKLWLICILTVSVVSIQSLSLLE-ETNYVSDCLASNNISQAEFQELIDRNSSEEDDLENTDRRYK 65

  Fly    64 CFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEACR------KKLELPFESGESSCKHAYEGF 122
            ||..| |:|..:..:.....:.|.|..:  .||.:..|      ||:   ::..|..|::|::..
  Fly    66 CFIHC-LAEKGNLLDTNGYLDVDKIDQI--EPVSDELREILYDCKKI---YDEEEDHCEYAFKMV 124

  Fly   123 HCIT 126
            .|:|
  Fly   125 TCLT 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 24/107 (22%)
PhBP 149..242 CDD:214783
Obp57cNP_611481.1 PhBP 28..131 CDD:214783 24/107 (22%)
Blue background indicates that the domain is not in the aligned region.

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