DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp56e

DIOPT Version :10

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_611445.1 Gene:Obp56e / 37267 FlyBaseID:FBgn0034471 Length:132 Species:Drosophila melanogaster


Alignment Length:141 Identity:36/141 - (25%)
Similarity:59/141 - (41%) Gaps:24/141 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MKSGILIALCLCLSLNEGLALLE-HEGETINR---CIQNYGGLTAENAERLERFKEWSDSYEEIP 63
            ||...:.|....|||...:.|.: .:.|...|   |::. .|:|.|.|..| |...::||..::.
  Fly     1 MKVFFVFAALAALSLASAVGLTDSQKAEAKQRAKACVKQ-EGITKEQAIAL-RSGNFADSDPKVK 63

  Fly    64 CFTRCYLSEMFDFYNNLTGFNKDG------IVGVFGRPVYEACRKKLELPFES--GESSCKHAYE 120
            ||..|:|.:        ||...:|      ::...|....||..|:::...:|  |...|..:|.
  Fly    64 CFANCFLEQ--------TGLVANGQIKPDVVLAKLGPIAGEANVKEVQAKCDSTKGADKCDTSYL 120

  Fly   121 GFHCITNMESH 131
            .:.|.  .|:|
  Fly   121 LYKCY--YENH 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 26/109 (24%)
PhBP 149..242 CDD:214783
Obp56eNP_611445.1 PBP_GOBP 21..128 CDD:460193 28/118 (24%)
Blue background indicates that the domain is not in the aligned region.

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