DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp56b

DIOPT Version :9

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_611443.1 Gene:Obp56b / 37265 FlyBaseID:FBgn0046880 Length:137 Species:Drosophila melanogaster


Alignment Length:145 Identity:29/145 - (20%)
Similarity:51/145 - (35%) Gaps:36/145 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MKSGILIALCLCLSLNE-----GLALLEHEGETINRCIQNYGGLTAENAERLERFKEWSDSYEEI 62
            ||...|:.:.|..:|:|     ..|.|....:....||:.. .:.|.:|..|...||.::..|.:
  Fly     1 MKLIYLLVVFLIFALSELVAGQSAAELAAYKQIQQACIKEL-NIAASDANLLTTDKEVANPSESV 64

  Fly    63 PCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEACRKKLELPFES----------------- 110
            .|:..|.             :.|.|::|..|:|..:...|..::.|.|                 
  Fly    65 KCYHSCV-------------YKKLGLLGDDGKPNTDKIVKLAQIRFSSLPVDKLKSLLTSCGTTK 116

  Fly   111 GESSCKHAYEGFHCI 125
            ..::|...|....|:
  Fly   117 SAATCDFVYNYEKCV 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 21/113 (19%)
PhBP 149..242 CDD:214783
Obp56bNP_611443.1 PhBP 35..135 CDD:214783 21/111 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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