DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp56a

DIOPT Version :9

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster


Alignment Length:109 Identity:29/109 - (26%)
Similarity:47/109 - (43%) Gaps:14/109 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 NISPSAKDAMK----DCLQDVH--QDEWKSFDAFAYYPVNEPIPCFTRCFVDKLHI-----FEEK 194
            |:|...||..|    .|.::|.  ::|....:|..:....|.|.||..||.:|:..     .:|.
  Fly    23 NLSDEQKDLAKQHREQCAEEVKLTEEEKAKVNAKDFNNPTENIKCFANCFFEKVGTLKDGELQES 87

  Fly   195 TRLWKLEAMKQNLGIPAKGARIRTCHRHRGRDRCATYYKQFTCY 238
            ..|.||.|:   :|.....|.:..|...:|.::|.|..|.:.|:
  Fly    88 VVLEKLGAL---IGEEKTKAALEKCRTIKGENKCDTASKLYDCF 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783
PhBP 149..242 CDD:214783 25/101 (25%)
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:279703 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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