DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp56f

DIOPT Version :9

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster


Alignment Length:124 Identity:29/124 - (23%)
Similarity:38/124 - (30%) Gaps:43/124 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ETINRCIQNYGGLT-AENAERLERFKEWSDSYEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVF 92
            |.|..|::...|.| .||.    :|....||.:. .||..|.|.                :.||.
  Fly    24 EKIKACLKRQLGYTITENT----KFDAKEDSLQS-KCFYHCLLE----------------VKGVI 67

  Fly    93 GRPVY--EACRKKLELPF--------ESGESSCKHA----------YEGFHCITNMESH 131
            .....  |..||.||..:        |..|..| |:          ||...|..::..|
  Fly    68 ANDAISSEQPRKVLEKKYGITDTDELEKAEEKC-HSIKASGKCELGYEILKCYQSITKH 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 27/119 (23%)
PhBP 149..242 CDD:214783
Obp56fNP_725926.1 PBP_GOBP <52..120 CDD:279703 18/85 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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