DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp56i

DIOPT Version :10

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster


Alignment Length:115 Identity:27/115 - (23%)
Similarity:45/115 - (39%) Gaps:29/115 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TINRCIQNYG----------GLTAEN-AERLERFKEWSDSYEEIPCFTRCYLSEMFDFYNN--LT 81
            |:..|....|          |:||:: |.|    .|..|....:.||.||:|..:....:|  :.
  Fly    15 TLPTCFVQAGPIKDQCMAAAGITAQDVANR----HETDDPGHSVKCFFRCFLENIGIIADNQIIP 75

  Fly    82 G-FNKDGIVGVFGRPVYEACRKKLELPFE------SGESSCKHAYEGFHC 124
            | |::     |.|..|.....:::|....      |.:.||:.|::...|
  Fly    76 GAFDR-----VLGHIVTAEAVERMEATCNMIKSETSHDESCEFAWQISEC 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 27/115 (23%)
PhBP 149..242 CDD:214783
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:460193 24/105 (23%)
Blue background indicates that the domain is not in the aligned region.

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