DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83cd and Obp56c

DIOPT Version :10

Sequence 1:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:241 Identity:52/241 - (21%)
Similarity:88/241 - (36%) Gaps:62/241 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LIALCLCLSLNEGLALLEHEGETINRCIQNYGGLTAENAERLERFKEWSDSYEEIPCFTRCY-LS 71
            |:|| |||:|:|.::                              |.|...:.....|||.. :|
  Fly     7 LMAL-LCLTLSEFVS------------------------------KAWVMFFIFYISFTRSLSVS 40

  Fly    72 EMFDFYNNLTGFNKDGIVGVFGRPVYEACRKKLELPFESGESSCKHAYEGFHCITNMESHPFTVI 136
            ........|.....:|......:.:..||.::.|:....        .:.|| ::.|.|.    .
  Fly    41 LNMSMTRTLVPDPPNGTENKLSQEMLRACMRRTEISMSQ--------LKLFH-MSLMNSD----Y 92

  Fly   137 DNMPNISPSAKDAMKDC--LQDVHQDEWKSFDAFAYYPV-----NEPIPCFTRCFVDKLHIFEEK 194
            :|..:|:|:...::.|.  |.|:      .|:..:..|.     |||:.||..|..:.|.:  ::
  Fly    93 NNDNDIAPTPVQSIGDVNNLGDL------DFNGNSQMPYLDLKHNEPLQCFVSCLYETLDL--DR 149

  Fly   195 TRLWKLEAMKQNLG--IPAKGARIRTCHRHRGRDRCATYYKQFTCY 238
            ..:...||.|..:.  |..:.|.|:.|...:|:.||...||...||
  Fly   150 YNVLLEEAFKNQVQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLCY 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 13/99 (13%)
PhBP 149..242 CDD:214783 26/99 (26%)
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 19/65 (29%)

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