DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and CG43896

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster


Alignment Length:231 Identity:59/231 - (25%)
Similarity:89/231 - (38%) Gaps:57/231 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDRTELEPPITTPHC 93
            |..::.:|..|:.|.||.:.|:||..|..|:.:     ...|    .||.|:          ..|
  Fly   161 FVENEANCGSYYVCSNGEATLQTCPQGSFFNTS-----VAAC----TVDQGN----------SQC 206

  Fly    94 SRLYGI-------FPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPE--CKNEEV 149
            ...|.|       ..|::.|.:|:.|.|...:..:|..|..::.:...|:......|  |.:...
  Fly   207 WVNYCIGQDDGSAVADKSNCSLFYVCSNNTATAQECPEGSYFESNNWGCVPGTCTTESPCDDSTT 271

  Fly   150 ANGFSC-------PAA---GELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIG--- 201
            ....||       ||:   |::.||...   ...|:||||:||::||.....|..|.||...   
  Fly   272 TTTESCAEETTEPPASCDCGDIKNADFI---PDEENCRKYFICIDGVLVAADCGKGNVFNANLSV 333

  Fly   202 ---DSDGT---GNCEDPE---DVPGCEDYY----GD 224
               |:|.|   .:|.|.|   |...|..|:    ||
  Fly   334 CEVDADNTCCVADCTDGEAKVDPQDCTKYFKCQSGD 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 12/42 (29%)
CBM_14 97..144 CDD:426342 11/55 (20%)
CBM_14 170..218 CDD:426342 20/59 (34%)
CG43896NP_001261732.1 CBM_14 96..147 CDD:426342
CBM_14 153..206 CDD:426342 15/63 (24%)
CBM_14 211..257 CDD:426342 9/45 (20%)
CBM_14 294..343 CDD:426342 18/51 (35%)
CBM_14 354..395 CDD:426342 5/16 (31%)
CBM_14 427..468 CDD:426342
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:426342
CBM_14 <1320..1361 CDD:426342
ChtBD2 1627..1675 CDD:214696
CBM_14 1684..1733 CDD:426342
ChtBD2 1752..1797 CDD:214696
CBM_14 1820..1868 CDD:426342
CBM_14 1896..1939 CDD:426342
ChtBD2 2046..2091 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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