DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and obst-B

DIOPT Version :9

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster


Alignment Length:243 Identity:83/243 - (34%)
Similarity:126/243 - (51%) Gaps:22/243 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KCPDDFGFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVDCGDRTELEP 86
            :||:..||||....||||:.|.:||...:.|.:|:.|:  |...:.|.||..:|:||..|::|:.
  Fly    85 ECPEPNGFYPDSKQCDKYYACLDGVPTERLCADGMVFN--DYSPIEEKCDLPYNIDCMKRSKLQT 147

  Fly    87 PITTPHCSRLYGIFPDENK--CDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQ--VPECKNE 147
            |..:.||.|..|.|..|..  ||.|:.|.:|:.:...|..||.::....:|.|.||  |..||:|
  Fly   148 PQPSLHCPRKNGYFGHEKPGICDKFYFCVDGQFNMITCPAGLVFNPKTGICGWPDQVGVTGCKSE 212

  Fly   148 EVANGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEG-VAREYGCPIGTVFKIGDSDGTGNCED 211
            :|.: |.||...| :.|.:..|:|.|.||:.:|:|:.| :.|..||.:|.||    .:....|:.
  Fly   213 DVFD-FECPKVNE-SIAVTHPRYADPNDCQFFYVCVNGDLPRRNGCKLGQVF----DEEKETCDW 271

  Fly   212 PEDVPGCEDYYGD-LDLKSIRKSELLAGLNSEGR---TKGAPKTKAAS 255
            ...||.|.|:|.| |..|.:.:.|     |.:.:   ||..|:.:..|
  Fly   272 ARKVPDCADWYKDRLTDKELDELE-----NPKPKTTTTKRPPRVRGQS 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 19/49 (39%)
CBM_14 97..144 CDD:366726 16/50 (32%)
CBM_14 170..218 CDD:366726 16/48 (33%)
obst-BNP_609339.1 CBM_14 89..139 CDD:279884 19/51 (37%)
CBM_14 156..204 CDD:279884 15/47 (32%)
CBM_14 233..278 CDD:279884 16/48 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444123
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1157817at2759
OrthoFinder 1 1.000 - - FOG0004529
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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