DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasp and cpg-2

DIOPT Version :10

Sequence 1:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:223 Identity:50/223 - (22%)
Similarity:72/223 - (32%) Gaps:47/223 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNV-DCGDRTELEPPITTP 91
            |.:|:......:..|..|::.:..|...|.|:.|   .|.  ||:..:| :|...     |...|
 Worm   253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL-----PTPQP 307

  Fly    92 HCSRLYGIFPDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVANGFSCP 156
            .|.. .|.|........|..|.||......|..||.:......|.:...|.||  :|.:...|..
 Worm   308 TCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC--QETSGEESGE 369

  Fly   157 AAGELANAGS--------------------------FSRHAHPEDCR-KYYICLEGVAREYGCPI 194
            |:||.:..||                          .....|...|. :...|..|....:.||.
 Worm   370 ASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPS 434

  Fly   195 GTVFKIGDSDGTGNCEDPEDVPGC--ED 220
            ..||    :|.:..|:.|:....|  ||
 Worm   435 SLVF----NDQSLICDYPQTSLKCLIED 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 10/43 (23%)
CBM_14 97..144 CDD:426342 11/46 (24%)
CBM_14 170..218 CDD:426342 11/48 (23%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:426342
CBM_14 138..190 CDD:426342
ChtBD2 245..293 CDD:214696 11/44 (25%)
CBM_14 311..359 CDD:426342 11/48 (23%)
CBM_14 403..454 CDD:426342 11/54 (20%)
Blue background indicates that the domain is not in the aligned region.

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